Jatropha Genome Database
- JcCA0305711.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0305711.10 + phase: 0
(732 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28152.m000908 zinc finger protein, putative 155 4e-37
30170.m013751 zinc finger protein, putative 60 2e-08
>28152.m000908 zinc finger protein, putative
Length = 759
Score = 155 bits (78), Expect = 4e-37
Identities = 120/134 (89%)
Strand = Plus / Plus
Query: 187 gcatctacatctccaccgccaccgcaaccgccagctttgaatctctcttacaagtgtact 246
|||||| | ||||| |||||||| || || || ||||||||||||||||| |||||||||
Sbjct: 214 gcatctccttctccgccgccaccacagccaccggctttgaatctctcttataagtgtact 273
Query: 247 gtttgcaacaaagctttcccttcttatcaagctcttggtggacacaaagccagccataaa 306
||||||||||| |||||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 274 gtttgcaacaaggctttcccttcttaccaagctctcggtggacacaaagccagccacaag 333
Query: 307 aaatcctcctctga 320
|||||||| |||||
Sbjct: 334 aaatcctcttctga 347
Score = 143 bits (72), Expect = 2e-33
Identities = 137/158 (86%), Gaps = 3/158 (1%)
Strand = Plus / Plus
Query: 1 atggctcttgaagcgctgaattcacccaccacagccactcctttcaattatgaggatact 60
||||| |||||||| || |||||||| || || || ||||||||||| ||||| ||||||
Sbjct: 1 atggcacttgaagcactaaattcaccaacaactgctactcctttcaactatgaagatact 60
Query: 61 tggaccaaaagaaaacgctccaagaggcctcgtggtgaatctc---ctcctaccgaagag 117
||||| ||||||||||| ||||||||||| || ||||||| | ||||||| |||||
Sbjct: 61 tggactaaaagaaaacgttccaagaggccacgcagtgaatccccagctcctactgaagaa 120
Query: 118 gagtatctcgctctttgccttattatgcttgctcgcgg 155
||||||||||||||||||||||| ||||||||||||||
Sbjct: 121 gagtatctcgctctttgccttatcatgcttgctcgcgg 158
Score = 127 bits (64), Expect = 1e-28
Identities = 233/293 (79%), Gaps = 21/293 (7%)
Strand = Plus / Plus
Query: 406 ggtagaacccacgagtgttctatctgtcataagaccttccccaccggtcaagccttaggt 465
||||| ||||| || |||||||||||||| |||||||| || ||||||||||| |||||
Sbjct: 415 ggtaggacccatgaatgttctatctgtcacaagacctttccaaccggtcaagctttaggc 474
Query: 466 ggccacaagcgccggcactatgaaggacctgttggtggccacaaccatagcagcagtgct 525
|| ||||||||||| |||||||||||||||| ||||||| ||||| ||| | ||| ||
Sbjct: 475 ggtcacaagcgccgccactatgaaggacctggtggtggcaacaacaatactaatagtact 534
Query: 526 gtaacctcatcggaaggtggcgc------------cagccaaagtcaaagtcaaagccgc 573
|||| || || |||||||| || || || ||||||||||||||||||
Sbjct: 535 ataacatcctcagaaggtggtgcaagtgcaacccagagtcagagtcaaagtcaaagccgc 594
Query: 574 ggcggttttgaatttgacttgaacttgccagctttgccggagttatggccaggcaa---- 629
||||| |||||| |||| |||||||||| |||||||| ||||| ||| ||| |||
Sbjct: 595 ggcggctttgaaattgatctgaacttgcctgctttgcctgagttttggtcagccaataat 654
Query: 630 -----cagagagcaagaagtggagagccctttgcctggaaagaaaccaagatt 677
||| || |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 655 aatggcagggatcaagaagtggagagtcctttgcctgggaagaaaccaagatt 707
>30170.m013751 zinc finger protein, putative
Length = 771
Score = 60.0 bits (30), Expect = 2e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 106 cctaccgaagaggagtatctcgctctttgccttattatgcttgctcgcgg 155
||||| ||||| || |||||||||||||||||| | ||||||||||||||
Sbjct: 133 cctactgaagaagaatatctcgctctttgccttgtcatgcttgctcgcgg 182