Jatropha Genome Database

JcCA0305691.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0305691.10 + phase: 0 /partial
         (654 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30055.m001602 Protein phosphatase 1 regulatory subunit SDS22, pu...    70   2e-11

>30055.m001602 Protein phosphatase 1 regulatory subunit SDS22,
            putative
          Length = 1458

 Score = 69.9 bits (35), Expect = 2e-11
 Identities = 212/271 (78%)
 Strand = Plus / Plus

                                                                        
Query: 379  agtaaaaaatcaactgagaaactggatgagcttgatgcaattgataatggggaaacatca 438
            |||||||||||||  ||| |||  ||||||||||||| ||||||| ||||||| ||| ||
Sbjct: 1177 agtaaaaaatcaaaggaggaacaagatgagcttgatgtaattgatgatggggatacacca 1236

                                                                        
Query: 439  tttgcagactttttctctgttaattatgtggaaagttcgaaacatagtgttgaaaagaaa 498
            ||||| ||| ||||  ||||||||  || ||| ||   ||||  |||||  |||||||||
Sbjct: 1237 tttgctgacctttttgctgttaatactgcggacagcctgaaagttagtggcgaaaagaaa 1296

                                                                        
Query: 499  ctgatagataaagctggtgagaacataaattctacaggtggcttggttactttgtctgca 558
             || |||||||||| ||| |  |||||||||  |  || ||| | || ||| | || | |
Sbjct: 1297 atgctagataaagcgggtaaagacataaatttgatgggcggcgtagtcactgtctcggga 1356

                                                                        
Query: 559  aagaaaaagaaaactaagaaccgagtagctaatcatgcagtccagttgcctgcagaggtt 618
            ||||||||||||||||| ||| | | |||   |  |  |||||||||||| || | | ||
Sbjct: 1357 aagaaaaagaaaactaaaaactgtggagcgggttctatagtccagttgcccgctgtgatt 1416

                                           
Query: 619  gaagttggaatgggtgggccgtcaacatggg 649
            ||||||||||||||||| || ||||||||||
Sbjct: 1417 gaagttggaatgggtggaccatcaacatggg 1447



 Score = 67.9 bits (34), Expect = 7e-11
 Identities = 135/168 (80%), Gaps = 3/168 (1%)
 Strand = Plus / Plus

                                                                        
Query: 172  aaggaagaagttccagtccatgaaagggatgacaatgtggttgaaaagaaactaaagagg 231
            |||||||| || |||||| ||||| ||| |||   | |||||||||| ||||||||||||
Sbjct: 973  aaggaagacgtaccagtctatgaagggggtgaagttatggttgaaaaaaaactaaagagg 1032

                                                                        
Query: 232  aaaaaatcacaggaccaagataatagtaataatgatcttactatggatgagtcaaagcag 291
            |||  ||||| ||| |||||| ||||   ||||||||||  ||| || ||    ||||||
Sbjct: 1033 aaactatcactggagcaagatgatag---taatgatcttggtattgaggatgggaagcag 1089

                                                            
Query: 292  gaaaggaagaaaacaattgagaaattaccaaagaaagatgttcaagtc 339
             ||||||||||| |||  ||| ||||  ||||||||||||||||||||
Sbjct: 1090 aaaaggaagaaagcaaacgaggaattctcaaagaaagatgttcaagtc 1137