Jatropha Genome Database
- JcCA0305301.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0305301.10 + phase: 0
(849 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28565.m000330 undecaprenyl diphosphate synthase, putative 153 2e-36
28565.m000328 undecaprenyl diphosphate synthase, putative 103 2e-21
28565.m000331 undecaprenyl diphosphate synthase, putative 101 7e-21
29830.m001441 undecaprenyl diphosphate synthase, putative 70 2e-11
>28565.m000330 undecaprenyl diphosphate synthase, putative
Length = 1113
Score = 153 bits (77), Expect = 2e-36
Identities = 224/273 (82%)
Strand = Plus / Plus
Query: 155 ctggttatagagcaggatttactgctcttatgtcgataatcaagtactgctctgagttgg 214
|||||||||| || || ||| | ||||||||||| || | |||||||||| ||||||||
Sbjct: 170 ctggttatagggctgggttttcagctcttatgtccatgcttaagtactgctatgagttgg 229
Query: 215 gagtgaagtacgttactatttatgcttttagcattgacaatttccgaagagaacctgaag 274
| |||||||| || || |||| ||| ||| ||||||| ||||| ||| | |||| |
Sbjct: 230 gggtgaagtatgtaaccatttttgcctttggcattgataattttaaaaggcgatctgatg 289
Query: 275 aggttaagatcataatggatctaatgttggaaaagactgagggaattctcaaagaagaga 334
||||| || | ||||||||||||||| |||| |||||| ||| || ||||| ||||| |
Sbjct: 290 aggttcaggttataatggatctaatgctggagaagactttggggatgctcaaggaagaaa 349
Query: 335 gcgttgtccatcaatatggtgttagagtttattttttaggtaatttgaagcttttgtgtg 394
|| | |||||||| |||||||||||||| |||||| | ||||||||||||||| | ||
Sbjct: 350 gcatagtccatcagtatggtgttagagtatattttattggtaatttgaagcttctagatg 409
Query: 395 agccactgagagttgcagcagaaaaggttatga 427
||||||| || ||||||||||||||||||||||
Sbjct: 410 agccactcagggttgcagcagaaaaggttatga 442
Score = 93.7 bits (47), Expect = 2e-18
Identities = 173/215 (80%)
Strand = Plus / Plus
Query: 629 agaagcacatgtacatggcactaggtcctgagccggatgtcctgattcgaacttccggcg 688
|||||||||||||||||||| ||| |||||| || ||| | ||||| |||||| | || |
Sbjct: 893 agaagcacatgtacatggcagtagctcctgaccctgatatactgatccgaactgcggggg 952
Query: 689 agtctcgtctcagtaatttcttactttggcagactagtcactgcactttgtattctcctg 748
|| | ||||| || || ||| ||||||||||| || || ||||| | |||||||||| |
Sbjct: 953 agacccgtctgagcaacttcctactttggcaggctggtgactgcccactgtattctccgg 1012
Query: 749 atgcactgtggccagagattggtctgtggaacttagtgtgggcagtactgaatttccagc 808
||| ||||||||||||| ||||||| | |||| || ||||| || || || |||||||
Sbjct: 1013 atgtactgtggccagagtttggtctacgacacttggtttgggcggtcctaaacttccagc 1072
Query: 809 gcaaccattcttatttggagaagaaaaagaagcag 843
| | | |||||| |||||||||||||||||||
Sbjct: 1073 ggagttgtgcttattcggagaagaaaaagaagcag 1107
>28565.m000328 undecaprenyl diphosphate synthase, putative
Length = 996
Score = 103 bits (52), Expect = 2e-21
Identities = 166/204 (81%)
Strand = Plus / Plus
Query: 636 catgtacatggcactaggtcctgagccggatgtcctgattcgaacttccggcgagtctcg 695
||||||||||||| ||| |||||| || ||| | ||||| ||||| || || ||| | ||
Sbjct: 783 catgtacatggcagtagctcctgaccctgatatactgatccgaacatcgggggagacccg 842
Query: 696 tctcagtaatttcttactttggcagactagtcactgcactttgtattctcctgatgcact 755
||| || || ||| ||||||||||| ||||| ||||| | |||||||||| |||| |||
Sbjct: 843 tctgagcaacttcctactttggcaggctagtaactgcccactgtattctccggatgtact 902
Query: 756 gtggccagagattggtctgtggaacttagtgtgggcagtactgaatttccagcgcaacca 815
|||||||||| |||| || | |||| || ||||| ||||| || |||||||| | ||
Sbjct: 903 gtggccagagtttggcctacgacacttggtttgggcggtactaaacttccagcgtagtca 962
Query: 816 ttcttatttggagaagaaaaagaa 839
| ||||||||||||||||||||||
Sbjct: 963 tgcttatttggagaagaaaaagaa 986
Score = 89.7 bits (45), Expect = 3e-17
Identities = 117/141 (82%)
Strand = Plus / Plus
Query: 287 taatggatctaatgttggaaaagactgagggaattctcaaagaagagagcgttgtccatc 346
|||||||||||||| |||| | ||||||||| | ||||| ||||| ||||| |||||||
Sbjct: 278 taatggatctaatgctggagacgactgagggtttgctcaaggaagaaagcgtagtccatc 337
Query: 347 aatatggtgttagagtttattttttaggtaatttgaagcttttgtgtgagccactgagag 406
| |||| ||||||| ||||| | ||||||||||||||| | | ||||||| || |
Sbjct: 338 agcatgggattagagtacattttattggtaatttgaagcttctagataagccacttaggg 397
Query: 407 ttgcagcagaaaaggttatga 427
|||||||||||||||||||||
Sbjct: 398 ttgcagcagaaaaggttatga 418
>28565.m000331 undecaprenyl diphosphate synthase, putative
Length = 1092
Score = 101 bits (51), Expect = 7e-21
Identities = 198/247 (80%)
Strand = Plus / Plus
Query: 178 gctcttatgtcgataatcaagtactgctctgagttgggagtgaagtacgttactatttat 237
||||||||||| || | |||||||||| ||||||||| |||||| | || ||||||| |
Sbjct: 169 gctcttatgtccatgcttaagtactgctatgagttgggggtgaagcatgtaactattttt 228
Query: 238 gcttttagcattgacaatttccgaagagaacctgaagaggttaagatcataatggatcta 297
|| ||| ||||||| ||||| ||| |||||| |||||| | | |||||||||||
Sbjct: 229 gcctttggcattgataattttaaaaggcgacctgatgaggttcggtttataatggatctg 288
Query: 298 atgttggaaaagactgagggaattctcaaagaagagagcgttgtccatcaatatggtgtt 357
|| |||| |||||| ||| | ||||| ||||| || | ||||||||||||||| ||
Sbjct: 289 atactggagaagactctggggttgctcaaggaagaaagtatagtccatcaatatggtatt 348
Query: 358 agagtttattttttaggtaatttgaagcttttgtgtgagccactgagagttgcagcagaa 417
||||| ||||| | ||||||||||||||| | ||||||||| || ||||||||||||
Sbjct: 349 agagtacattttattggtaatttgaagcttctagatgagccactcagggttgcagcagaa 408
Query: 418 aaggtta 424
|||||||
Sbjct: 409 aaggtta 415
Score = 87.7 bits (44), Expect = 1e-16
Identities = 173/216 (80%)
Strand = Plus / Plus
Query: 628 gagaagcacatgtacatggcactaggtcctgagccggatgtcctgattcgaacttccggc 687
|||||||||||| ||||||| ||| |||||| || ||| | ||||| ||||| || ||
Sbjct: 871 gagaagcacatgcccatggcagtagctcctgatcctgatatactgatccgaacatcaggg 930
Query: 688 gagtctcgtctcagtaatttcttactttggcagactagtcactgcactttgtattctcct 747
||| | ||||| || || ||| ||||||||||| || || ||||| |||||||||
Sbjct: 931 gagacccgtctgagcaacttcctactttggcaggctggtgactgccaagggtattctccg 990
Query: 748 gatgcactgtggccagagattggtctgtggaacttagtgtgggcagtactgaatttccag 807
|||||| |||||||||| |||| |||| | | || |||||||||||||| || ||||||
Sbjct: 991 gatgcattgtggccagacattgttctgcgacagttggtgtgggcagtactaaacttccag 1050
Query: 808 cgcaaccattcttatttggagaagaaaaagaagcag 843
|| || ||||||||||||||||||||||||||
Sbjct: 1051 tataattatgcttatttggagaagaaaaagaagcag 1086
>29830.m001441 undecaprenyl diphosphate synthase, putative
Length = 1146
Score = 69.9 bits (35), Expect = 2e-11
Identities = 125/155 (80%)
Strand = Plus / Plus
Query: 617 tggtagacattgagaagcacatgtacatggcactaggtcctgagccggatgtcctgattc 676
||||||||||||||| ||||||||||||| ||| ||||||||| || ||||||| |
Sbjct: 842 tggtagacattgagagaaacatgtacatggctgtagctcctgagcctgacatcctgatcc 901
Query: 677 gaacttccggcgagtctcgtctcagtaatttcttactttggcagactagtcactgcactt 736
||| ||| || || | || | || || ||| ||||||||||| ||||| | |||| |
Sbjct: 902 gaagttctggagaaacccgcttaagcaacttcctactttggcaggctagtgattgcatgt 961
Query: 737 tgtattctcctgatgcactgtggccagagattggt 771
|||||||||| |||||| |||||||||| ||||||
Sbjct: 962 tgtattctccagatgcattgtggccagaaattggt 996
Score = 61.9 bits (31), Expect = 6e-09
Identities = 85/103 (82%)
Strand = Plus / Plus
Query: 155 ctggttatagagcaggatttactgctcttatgtcgataatcaagtactgctctgagttgg 214
||||| ||||||| |||||| | |||||||| || ||| | |||||||| | ||| ||||
Sbjct: 170 ctggtcatagagctggattttcagctcttatatctatacttaagtactgttatgaattgg 229
Query: 215 gagtgaagtacgttactatttatgcttttagcattgacaattt 257
| || ||||| || ||| ||||||| ||||||||||| |||||
Sbjct: 230 gggtaaagtatgtaactgtttatgcctttagcattgataattt 272