Jatropha Genome Database
- JcCA0304891.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0304891.10 - phase: 0 /partial
(1486 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m013632 conserved hypothetical protein 462 e-129
28359.m000279 conserved hypothetical protein 293 2e-78
29955.m001180 conserved hypothetical protein 145 9e-34
>30170.m013632 conserved hypothetical protein
Length = 2289
Score = 462 bits (233), Expect = e-129
Identities = 410/469 (87%)
Strand = Plus / Plus
Query: 656 acatttttcatttgctgggaactcaactatcatacttgtggagcacttttctgcagttcc 715
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |
Sbjct: 914 acatttttcatttgctgggtgctcaaatatcatacttgtggagcacttttctgcagtttc 973
Query: 716 acaggacaaataaaaagaagatactaaggtttctgcgtgatgcatgggctaaggatcgca 775
| ||| ||||||||| ||||| | | |||||||||||| ||||||||||| ||||
Sbjct: 974 atagggcaaataaaataaagattttggaatgtctgcgtgatgcctgggctaaggaccgca 1033
Query: 776 gaactgagtggtcaatatggatggtatactctaaggttgagatgcctcatcattacataa 835
|| |||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1034 gagctgaatggtcaatttggatggtttactctaaggttgagatgcctcatcattacataa 1093
Query: 836 gcagtggaactcatgatgcttctcatattgtggttgataaaagagtttcaagtttctgga 895
| ||||| | ||||||| |||| || | | ||||| ||||||||||| ||||||||||
Sbjct: 1094 gtagtgggagtcatgattcttcccaccatattgttgacaaaagagtttcgagtttctgga 1153
Query: 896 agttagctgatgatcctgcccagactgctgctacacgtgctgaacttcatcggcgaagta 955
|||||||| ||||||||| ||||||||| ||||| |||||||| |||||||| |||||||
Sbjct: 1154 agttagctaatgatcctgtccagactgcagctactcgtgctgagcttcatcgtcgaagta 1213
Query: 956 ttgcccaaatgaggataaatgctagttcaatccaagacatgtatatattcggagaccctc 1015
||| |||||||||||| ||| || | ||||| ||||| ||||||||||| ||||| ||||
Sbjct: 1214 ttggccaaatgaggattaatactcggtcaattcaagatatgtatatatttggagatcctc 1273
Query: 1016 tgcgagttcctattatatatgttgagcgtgtcataaatgcaccacgccgtacttttagtg 1075
| || |||||||||| | ||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 1274 tacggattcctattatctttgtggagcgtgtcataaatgcaccacgccgtactcttagtg 1333
Query: 1076 aaaattcttattttagaaatttggacctgatagattctcctagcttact 1124
| ||||||||||||||| ||||||||||||||||||| ||| |||||||
Sbjct: 1334 agaattcttattttagagatttggacctgatagattcacctggcttact 1382
Score = 307 bits (155), Expect = 1e-82
Identities = 260/295 (88%)
Strand = Plus / Plus
Query: 1189 gagttgaagattgttgtgtttgtgcatgggtttcagggacatcatctggatttacgtctt 1248
||||| ||||||||||| || || ||||| |||||||||||||||||||||||||| |||
Sbjct: 1447 gagttaaagattgttgttttcgtacatggatttcagggacatcatctggatttacgactt 1506
Query: 1249 attcgaaatcaatggcttttgatagaccccaagatagaaattctcatgtcggaggcaaat 1308
||||||||||||||||||||||||| || ||||||||| |||||||||| ||| ||||
Sbjct: 1507 gttcgaaatcaatggcttttgatagatccaaagatagaagttctcatgtcacaggtaaat 1566
Query: 1309 gaagaaaaaacatcaggagacttcagagaaatgggactaaggcttgctcaggaggtgatc 1368
|||||||||||||||||||||||||||||||||||| ||||||| || || ||||||
Sbjct: 1567 gaagaaaaaacatcaggagacttcagagaaatgggattaaggctggcaagtgaagtgatc 1626
Query: 1369 tcttttcttaaaaagaaatctgacaaatattcaagatctggtggtctgagagatatcaag 1428
|| ||| |||||| ||| || |||||||||||||||||||||| ||||| ||||||
Sbjct: 1627 tcatttattaaaagaaaagtggaaaaatattcaagatctggtggtccaagagaaatcaag 1686
Query: 1429 cttagctttgttgggcattccattggaaatgtaattataagaacagcattagcag 1483
||||| |||||||||||||||||||| ||||| ||||||||| ||||||||||||
Sbjct: 1687 cttagttttgttgggcattccattggcaatgtcattataagagcagcattagcag 1741
Score = 270 bits (136), Expect = 2e-71
Identities = 199/220 (90%)
Strand = Plus / Plus
Query: 29 ccacatctgctgttattttaaaatttgagcttctgcaagctcccataacagagaatagac 88
||||||||||||||||||| |||||||||||| | || || ||||| ||||||||||| |
Sbjct: 320 ccacatctgctgttattttgaaatttgagcttatacatgcccccatgacagagaataggc 379
Query: 89 ttgagttgctagcatatctggaagcttcctctgttgcggtccatgaatttcgaattcctc 148
|||||||| ||||||| ||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 380 ttgagttgttagcatacctggaagcttcctctgtcgcagtccatgaatttcgaattcctc 439
Query: 149 ctaaagctctttttggactgcattcatactgccctatccattttgatatatttcatgctg 208
||||||||||| | ||| ||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 440 ctaaagctcttctgggattgcattcatactgccctatccattttgatgtgtttcatgctg 499
Query: 209 tgctggttgaagcaagcgtccatgtcagtctactaaaagc 248
|||| || |||||||| |||||| |||||||||| |||||
Sbjct: 500 tgctcgtcgaagcaagtgtccatctcagtctactgaaagc 539
Score = 137 bits (69), Expect = 2e-31
Identities = 162/193 (83%)
Strand = Plus / Plus
Query: 367 atgaacaagataatgcttattaaaacattgttagttgcccgtgacactttacttgaagag 426
|||||| |||| ||||| ||||| |||| ||||| | ||||| ||||||| | ||||
Sbjct: 643 atgaaccagatcatgctcgttaaatcattattagtatcacgtgatgctttactgggagag 702
Query: 427 ctacaaagacttagcaaagccattgcccaagtaattgattttactgattttacatccaaa 486
||||| |||||||||||| |||| | ||||||||||||||| |||||||||| | |||||
Sbjct: 703 ctacagagacttagcaaatccatcgaccaagtaattgatttaactgattttatagccaaa 762
Query: 487 atgaatgatataaatatgcttgattctatccggagagcggatcttggtactgcaaaaggt 546
||||||||| | || ||| |||||||||||| ||||| ||||| ||||||||| | |||
Sbjct: 763 atgaatgatgtgaagatgtttgattctatcctaagagcagatctgggtactgcatatggt 822
Query: 547 gaagttggcgggc 559
|||||||| ||||
Sbjct: 823 gaagttggggggc 835
>28359.m000279 conserved hypothetical protein
Length = 2427
Score = 293 bits (148), Expect = 2e-78
Identities = 259/296 (87%)
Strand = Plus / Plus
Query: 1188 tgagttgaagattgttgtgtttgtgcatgggtttcagggacatcatctggatttacgtct 1247
|||||||||| | ||||| || || ||||| |||||||||||||||||||||||||| ||
Sbjct: 1584 tgagttgaaggtggttgtcttcgttcatggttttcagggacatcatctggatttacgact 1643
Query: 1248 tattcgaaatcaatggcttttgatagaccccaagatagaaattctcatgtcggaggcaaa 1307
| |||||||||||||||||||| |||||||||||||||| |||||||||| |||| |||
Sbjct: 1644 tgttcgaaatcaatggcttttggtagaccccaagatagagtttctcatgtcagaggtaaa 1703
Query: 1308 tgaagaaaaaacatcaggagacttcagagaaatgggactaaggcttgctcaggaggtgat 1367
|||||| |||||||| |||||||||||||||||||||| ||| | |||||||| || ||
Sbjct: 1704 tgaagacaaaacatctggagacttcagagaaatgggacagaggttggctcaggaagttat 1763
Query: 1368 ctcttttcttaaaaagaaatctgacaaatattcaagatctggtggtctgagagatatcaa 1427
|||||||||||||||||| || ||| ||| ||||| || | |||||| ||||||
Sbjct: 1764 ctcttttcttaaaaagaagatggataaagtttctagatcctgtagcttgagaggtatcaa 1823
Query: 1428 gcttagctttgttgggcattccattggaaatgtaattataagaacagcattagcag 1483
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 1824 gcttagctttgttgggcattcaattggaaatgtaatcataagaacagcattagcag 1879
Score = 230 bits (116), Expect = 2e-59
Identities = 292/348 (83%), Gaps = 2/348 (0%)
Strand = Plus / Plus
Query: 757 gcatgggctaaggatcgcagaactgagtggtcaatatggatggtatactctaaggttgag 816
||||||||||||||||| ||| |||| |||||||||||||| |||| |||||||||||||
Sbjct: 1153 gcatgggctaaggatcgaagagctgaatggtcaatatggatagtatcctctaaggttgag 1212
Query: 817 atgcctcatcattacataagcagtggaactcatgatgcttctca-tattgtggttgataa 875
|||||||||||||||||||| ||| ||| | |||| |||| | ||| ||| | | |
Sbjct: 1213 atgcctcatcattacataagtagtcgaaatgatgaatcttccaactatgctggctca-ag 1271
Query: 876 aagagtttcaagtttctggaagttagctgatgatcctgcccagactgctgctacacgtgc 935
|||||||| | ||||||||||||| | |||||||||||||| |||||||||| |||||
Sbjct: 1272 aagagttttgactttctggaagttacccgatgatcctgcccaaactgctgctatgcgtgc 1331
Query: 936 tgaacttcatcggcgaagtattgcccaaatgaggataaatgctagttcaatccaagacat 995
||| |||||||||||||||||||||||||||| ||| ||| | ||||| ||||||||
Sbjct: 1332 tgagcttcatcggcgaagtattgcccaaatgaagattaataatcaatcaattcaagacat 1391
Query: 996 gtatatattcggagaccctctgcgagttcctattatatatgttgagcgtgtcataaatgc 1055
| |||| || ||||| |||||||| ||||||||||| ||| || || ||||| |||||
Sbjct: 1392 gcatatttttggagatcctctgcgcattcctattataattgtggaacgcgtcatgaatgc 1451
Query: 1056 accacgccgtacttttagtgaaaattcttattttagaaatttggacct 1103
||| || ||||| || |||||||||||||| || | ||||||||||||
Sbjct: 1452 accgcggcgtaccttaagtgaaaattcttacttcacaaatttggacct 1499
Score = 190 bits (96), Expect = 2e-47
Identities = 165/188 (87%)
Strand = Plus / Plus
Query: 25 ccatccacatctgctgttattttaaaatttgagcttctgcaagctcccataacagagaat 84
||||| ||||||||||||||||| ||||||||||| |||||||||| ||||| ||||||
Sbjct: 433 ccatctacatctgctgttattttgaaatttgagctcttgcaagctccgataacggagaat 492
Query: 85 agacttgagttgctagcatatctggaagcttcctctgttgcggtccatgaatttcgaatt 144
|||||||||||| || ||||| || |||||||||||||| ||||||||||||||||||
Sbjct: 493 caacttgagttgctggcttatctagatgcttcctctgttgcagtccatgaatttcgaatt 552
Query: 145 cctcctaaagctctttttggactgcattcatactgccctatccattttgatatatttcat 204
|| |||||||| ||||| ||| |||||||||| ||||| ||||||||||| ||||||
Sbjct: 553 ccccctaaagcccttttgggattgcattcatattgccccgtccattttgatgcttttcat 612
Query: 205 gctgtgct 212
||||||||
Sbjct: 613 gctgtgct 620
>29955.m001180 conserved hypothetical protein
Length = 2067
Score = 145 bits (73), Expect = 9e-34
Identities = 142/165 (86%)
Strand = Plus / Plus
Query: 1201 gttgtgtttgtgcatgggtttcagggacatcatctggatttacgtcttattcgaaatcaa 1260
||||| ||||| |||||||||||||||||||||||||||||||| ||| |||| ||||||
Sbjct: 1522 gttgtctttgtacatgggtttcagggacatcatctggatttacggcttgttcgtaatcaa 1581
Query: 1261 tggcttttgatagaccccaagatagaaattctcatgtcggaggcaaatgaagaaaaaaca 1320
|||||||| ||||| || |||| ||| |||| |||||||||||||||||||| |||||
Sbjct: 1582 tggcttttaatagatccgaagacagagtttcttatgtcggaggcaaatgaagacaaaact 1641
Query: 1321 tcaggagacttcagagaaatgggactaaggcttgctcaggaggtg 1365
|| || |||||||| ||||| |||||||| || |||||||||
Sbjct: 1642 gatggggatttcagagagatggggctaaggctagcacaggaggtg 1686
Score = 71.9 bits (36), Expect = 1e-11
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 928 acacgtgctgaacttcatcggcgaagtattgcccaaatgaggat 971
||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 1249 acacgtgctgagcttcatcggcaaagtattgcccaaatgaggat 1292
Score = 65.9 bits (33), Expect = 7e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 1426 aagcttagctttgttgggcattccattggaaatgtaattataaga 1470
||||||||||||||||| ||||| ||||||||| |||||||||||
Sbjct: 1747 aagcttagctttgttggacattctattggaaatataattataaga 1791
Score = 56.0 bits (28), Expect = 6e-07
Identities = 76/92 (82%)
Strand = Plus / Plus
Query: 127 gtccatgaatttcgaattcctcctaaagctctttttggactgcattcatactgccctatc 186
|||||||||||| || ||||||||||||| ||| | || ||||||| || |||||| |
Sbjct: 508 gtccatgaatttagacttcctcctaaagcgcttctggggttgcattcttattgccctgta 567
Query: 187 cattttgatatatttcatgctgtgctggttga 218
||||||||| ||||||| |||| || |||||
Sbjct: 568 cattttgatgcatttcattctgtccttgttga 599