Jatropha Genome Database
- JcCA0304841.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0304841.10 + phase: 0
(1224 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m013901 hypothetical protein 365 e-100
>30170.m013901 hypothetical protein
Length = 696
Score = 365 bits (184), Expect = e-100
Identities = 418/496 (84%)
Strand = Plus / Plus
Query: 729 aggtcattttcgactttatccatttgactacaaggctgctgtgactgaactcctcggtaa 788
|||||||||||| | |||||| ||||||||||||||||||||||||| || || |||||
Sbjct: 201 aggtcattttcggcaatatccagttgactacaaggctgctgtgactgagcttcttggtaa 260
Query: 789 ggcagctgcagtttactcacaaagaattcgacgacttgaaggagaaagattgggtgtaga 848
|||| | ||||||||||||||||||| |||||||||||||||||| || || |||||||
Sbjct: 261 ggcatcaacagtttactcacaaagaatacgacgacttgaaggagaaggaatgagtgtaga 320
Query: 849 ggggacgcatgatgagatctcggaaccaattggcgatctgaggaaagcagtagaaagtcc 908
|||| ||||||||||||||||||||||| || || |||||||||| | |||||
Sbjct: 321 ggggggacatgatgagatctcggaaccaatgtctgaccttaggaaagcagctgcgagtcc 380
Query: 909 aaaccagagcttttgtggagttactatccaaccaagtgacaatttcttcatgccaagctc 968
|| ||||||||| |||| ||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 381 aagccagagcttccgtggggttactatccaaccaagtgaccatttctacatgccaagctc 440
Query: 969 agtgggctattatgagggtagagatatgggttccttgcaagatgaacacaaggaagattt 1028
|||||| |||||||||||||||||| ||||||||||||||| ||||| ||||||| ||
Sbjct: 441 agtggggtattatgagggtagagatgggggttccttgcaagacgaacagaaggaaggctt 500
Query: 1029 gattcatttgcataaccctccgcgtattaacgctcatggtgttcttggtcaagtactttt 1088
||||||||||| || |||||| ||||| ||||| || || ||||||||| | |||||
Sbjct: 501 gattcatttgcctagccctccaaaaattaatgctcacggagtacttggtcaaatcctttt 560
Query: 1089 cgacgtatgtgttccaaagaccgttgaagattgggatattaagtcatcagcatcattaag 1148
|| || || |||||||||| ||||||||||||||||| | ||| || |||| || ||
Sbjct: 561 tgatgtctgcgttccaaagaatgttgaagattgggatataaggtcgtcgacatccttgag 620
Query: 1149 tagacagccatatagttctacccgaaggcatgctccatttaatcccatcaaatgcatact 1208
|||||| ||||||| || | || || |||||||||||||| ||||||||||| ||||
Sbjct: 621 tagacaaccatatacatccatgcggagacatgctccatttaaccccatcaaatgtatacg 680
Query: 1209 ccgttcaagactgtaa 1224
||||||||| |||||
Sbjct: 681 tcgttcaagattgtaa 696
Score = 127 bits (64), Expect = 2e-28
Identities = 148/176 (84%)
Strand = Plus / Plus
Query: 108 ctatgtagagctctactcgtctctgggatggaattcacttgtttgtcactctcaattcct 167
|||||||||||||||||| || |||| |||||||| |||||||||||||| ||||| ||
Sbjct: 30 ctatgtagagctctactcttcgttgggttggaattcccttgtttgtcactcccaatttct 89
Query: 168 caatatgtttttcccagacaaagctgaagctttagcatttgatattctcaacagaattgt 227
||| |||||||| | || || |||||| |||||||| ||||||| ||||| |||| |
Sbjct: 90 caacatgtttttttccgagaaggctgaaactttagcacttgatatcctcaatgaaattat 149
Query: 228 tgaggaactaaagacgaggccttgccctctggtcttcatgtctttttctggaggtc 283
|||||| ||||||| |||||| |||||||| ||||| ||||||||||||||||
Sbjct: 150 tgaggagctaaagatgaggccatgccctctagtctttgcatctttttctggaggtc 205