Jatropha Genome Database
- JcCA0304441.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0304441.20 - phase: 0
(960 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28934.m000056 Rop guanine nucleotide exchange factor, putative 331 5e-90
30143.m001222 Rop guanine nucleotide exchange factor, putative 317 7e-86
>28934.m000056 Rop guanine nucleotide exchange factor, putative
Length = 2022
Score = 331 bits (167), Expect = 5e-90
Identities = 515/631 (81%)
Strand = Plus / Plus
Query: 301 tcagagattgatatgatgaaggcaaggttcgcaaaattgttgcttggagaagacatgtca 360
||||||||||| |||||||||| |||||| |||||||| ||||||| ||||| ||||||
Sbjct: 634 tcagagattgagatgatgaaggaaaggttttcaaaattgctgcttggtgaagatatgtca 693
Query: 361 gggtcagggaaaggtgcatgcacagctatggctatttcaaatgctattactaatctctgt 420
|| | || || || | |||||||| | |||||||||||||||||||||||||| ||
Sbjct: 694 ggttgtggaaatggggtttgcacagcattagctatttcaaatgctattactaatctatgc 753
Query: 421 gttactatttttgggcaactgtggagattggagccattggcaccagagaagaaatcaatg 480
| ||| | ||||| ||||| ||||| || ||||| || | |||||||||||| |||||
Sbjct: 754 gctaccttgtttggccaactatggaggttagagcctttacctccagagaagaaagcaatg 813
Query: 481 tggagaagagagatggagtggcttctttgtgttggtgatcacattgtggaattaataccc 540
||| ||||||||||||| ||| |||||||||| |||| ||||| ||||| |||||||||
Sbjct: 814 tggcgaagagagatggaatggtttctttgtgtgagtgaccacatagtggagttaataccc 873
Query: 541 tcttggcaaacatttcctgatggtagtaagcttgaggtaatgacttgcaggccaagatca 600
|||||||| |||||||| ||||| || ||||||||||| ||||||||||| || | |||
Sbjct: 874 tcttggcagacatttccagatggaagcaagcttgaggttatgacttgcagaccgcgttca 933
Query: 601 gacctttttatcaatctcccagctctccgtaaactagacaatatgcttcttgaaatatta 660
|| |||| | |||||||||||||| || ||| |||| |||||||||||||| |||||
Sbjct: 934 gatctttacgtaaatctcccagctctgcgcaaattagataatatgcttcttgagatattg 993
Query: 661 gatagctttgtcaatgcagagttctggtatgttgatcaaggcattgtagctccagatgca 720
|||||||||| |||| ||||||||||||||||||| ||||| || |||| |||| ||
Sbjct: 994 gatagctttgacaatacagagttctggtatgttgaccaagggatcttagcctcagaggct 1053
Query: 721 gatggttcagcttctttcagaaagacaattcagagacaagaggagaagtggtggctgcct 780
||||| ||| | |||||| | | | | |||| | |||||||| ||||||||||| |||
Sbjct: 1054 gatgggtcatcatctttccgtagggcccttcaacgccaagaggaaaagtggtggctacct 1113
Query: 781 gtaccccgtatccccgctggtggcctaagtgataattcaagaaagcagttgaaccataca 840
|| || || | || || ||||||| ||| |||||||||||| | ||| | |||| |
Sbjct: 1114 gtgcctcgagttcctccttgtggcctccatgaaaattcaagaaaggaattgcagcataaa 1173
Query: 841 cgcgaatgcactaatcaaatactaaaagctgcaatggctatcaatagtattgctttagct 900
|| || ||||| ||||| || ||||||||||||||||| ||||| || ||| ||||||||
Sbjct: 1174 cgtgattgcacaaatcagatgctaaaagctgcaatggcaatcaacagcattactttagct 1233
Query: 901 gaaatggaagttcctgactcatacatggaag 931
|| |||||||| ||||| ||||| ||||||
Sbjct: 1234 gatatggaagtccctgaaacatacttggaag 1264
>30143.m001222 Rop guanine nucleotide exchange factor, putative
Length = 1773
Score = 317 bits (160), Expect = 7e-86
Identities = 250/280 (89%)
Strand = Plus / Plus
Query: 298 atttcagagattgatatgatgaaggcaaggttcgcaaaattgttgcttggagaagacatg 357
||||| || |||||||||||||||| || || ||||||||| | ||||| |||||||||
Sbjct: 337 atttcggaaattgatatgatgaaggagagatttgcaaaattgctacttggtgaagacatg 396
Query: 358 tcagggtcagggaaaggtgcatgcacagctatggctatttcaaatgctattactaatctc 417
|||||||| || ||||| | ||||||||| |||||||||||||||| ||||| |||||
Sbjct: 397 tcagggtctggtaaaggggtttgcacagctttggctatttcaaatgccattaccaatctt 456
Query: 418 tgtgttactatttttgggcaactgtggagattggagccattggcaccagagaagaaatca 477
||||||||| | |||||||||||||||||| ||||||| ||| | | ||||||||||||
Sbjct: 457 tgtgttactgtctttgggcaactgtggagactggagccgttgccctctgagaagaaatca 516
Query: 478 atgtggagaagagagatggagtggcttctttgtgttggtgatcacattgtggaattaata 537
|||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 517 atgtggagaagagaaatggaatggcttctttgtgttggtgatcacattgtggagttaata 576
Query: 538 ccctcttggcaaacatttcctgatggtagtaagcttgagg 577
|| |||||||||||||||||||||||||||||||||||||
Sbjct: 577 ccttcttggcaaacatttcctgatggtagtaagcttgagg 616
Score = 260 bits (131), Expect = 1e-68
Identities = 248/287 (86%)
Strand = Plus / Plus
Query: 652 gaaatattagatagctttgtcaatgcagagttctggtatgttgatcaaggcattgtagct 711
|||||||||||||| |||| | ||||||| ||||||||||||||||| ||||||||
Sbjct: 616 gaaatattagatagttttgcggacacagagttttggtatgttgatcaagggattgtagcc 675
Query: 712 ccagatgcagatggttcagcttctttcagaaagacaattcagagacaagaggagaagtgg 771
|||||||||||||| ||| | ||||| | || |||| ||||| |||||||||||||||
Sbjct: 676 ccagatgcagatggatcaacctcttttcgcaaagcaatccagaggcaagaggagaagtgg 735
Query: 772 tggctgcctgtaccccgtatccccgctggtggcctaagtgataattcaagaaagcagttg 831
||||| |||||||||||| |||| |||||||| || |||||||| ||||||||||| |||
Sbjct: 736 tggcttcctgtaccccgtctccctgctggtggtcttagtgataaatcaagaaagcaattg 795
Query: 832 aaccatacacgcgaatgcactaatcaaatactaaaagctgcaatggctatcaatagtatt 891
||||| || || |||||||| ||||||||| |||||||||||||||| ||||| || |||
Sbjct: 796 aaccacactcgtgaatgcacaaatcaaatattaaaagctgcaatggcaatcaacagcatt 855
Query: 892 gctttagctgaaatggaagttcctgactcatacatggaagcacttcc 938
||||| ||||||||||| |||||| |||||||| ||||| |||||||
Sbjct: 856 gctttggctgaaatggatgttccttactcatacttggaaacacttcc 902