Jatropha Genome Database

JcCA0304431.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0304431.30 - phase: 1 /pseudo/partial
         (361 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013772 natural resistance-associated macrophage protein, ...   100   1e-20

>30170.m013772 natural resistance-associated macrophage protein,
           putative
          Length = 1389

 Score = 99.6 bits (50), Expect = 1e-20
 Identities = 149/182 (81%)
 Strand = Plus / Plus

                                                                       
Query: 166 ttttagatccggggaatttagaaagggatctccaggccggagcgattgctggatactcgc 225
           |||||||||| || ||||||||| | ||||| || || ||||| ||||||||||| ||| 
Sbjct: 260 ttttagatccaggtaatttagaaggagatcttcaagctggagcaattgctggatattcgt 319

                                                                       
Query: 226 tgctttggctactggtgtgggccaccgtcatggggttgttgatccaggtgctatcggccc 285
           |  | ||| | ||| |||||||||| || ||||||||| |||||||| |||||||||| |
Sbjct: 320 tattgtggttgctgatgtgggccacggttatggggttgctgatccagatgctatcggcgc 379

                                                                       
Query: 286 gcgtcggtgtagccatcggacgtcacttggcaaaattgtgtagagaggagtatcccaatt 345
           | || ||||| ||||  ||| | || || ||  | |||||||||||||||||||||||||
Sbjct: 380 gtgtaggtgtggccacgggaaggcatttagcggagttgtgtagagaggagtatcccaatt 439

             
Query: 346 gg 347
           ||
Sbjct: 440 gg 441