Jatropha Genome Database
- JcCA0304341.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0304341.10 - phase: 2 /partial
(808 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
27395.m000083 protein phosphatase pp2a regulatory subunit B, put... 787 0.0
29794.m003344 protein phosphatase pp2a regulatory subunit B, put... 424 e-118
30147.m013921 protein phosphatase pp2a regulatory subunit B, put... 52 5e-06
>27395.m000083 protein phosphatase pp2a regulatory subunit B,
putative
Length = 585
Score = 787 bits (397), Expect = 0.0
Identities = 523/565 (92%)
Strand = Plus / Plus
Query: 244 gtttgaggaacaggaggcaccaggttctagatcatttttcacagagataattgcttcaat 303
||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||
Sbjct: 18 gtttgaggaacaggaggcaccgggctctagatcatttttcacggagataattgcttcaat 77
Query: 304 ctcagatattaaatttgctaaggatggaaggcatattcttagtcgtgattacatgactct 363
|||||||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||||
Sbjct: 78 ctcagatattaaatttgctaaggatggaagacatatacttagccgtgactacatgactct 137
Query: 364 taagttatgggacatcaatatggattcaggtccagttgcaaccttccaggttcatgaata 423
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 138 taagttgtgggacatcaatatggattcgggtccagttgcaaccttccaggttcatgagta 197
Query: 424 tttaagacctaagttatgtgatttgtatgaaaatgattcaatcttcgataaattcgagtg 483
||||||||| ||||| |||||| | |||||||||||||||||||| ||||||||||||||
Sbjct: 198 tttaagacccaagttgtgtgatctatatgaaaatgattcaatctttgataaattcgagtg 257
Query: 484 ttgtttgagcggtgatggattgcgagtggcaaccgggtcttacagcaatctgttccgtgt 543
||| |||| ||||||||| | ||||||||||| || |||||||||||||||||||||||
Sbjct: 258 ttgcctgagtggtgatggactacgagtggcaacaggatcttacagcaatctgttccgtgt 317
Query: 544 gtttggttgtgcccctggaagcactgaagaaacaactttggaagccagcaaaaatccaat 603
||||||||||||| |||| || | ||| | ||| ||||||||||||||||||||||| ||
Sbjct: 318 gtttggttgtgcctctggcagtaatgaggcaactactttggaagccagcaaaaatcctat 377
Query: 604 gaggagacaagttcagaccccttcaaggccttccagatccctaagcagtataacacgtgt 663
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 378 gagaagacaagttcagaccccttcaaggccttcgagatccctaagcagtataacacgtgt 437
Query: 664 tgtaagacggggagcagagagcccaggagttgatgcaaatggaaattcttttgatttcac 723
||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 438 tgtaagacggggagcggagagcccaggagtcgatgcaaatgggaattcttttgatttcac 497
Query: 724 aacaaaattgctgcatctagcatggcacccaaccgaaaactcaatcgcctgtgctgctgc 783
||||| ||||| |||||||| ||||||||||| |||||||| || ||||||||||||||
Sbjct: 498 cacaaagttgctccatctagcgtggcacccaacagaaaactcgattgcctgtgctgctgc 557
Query: 784 aaacagcttgtacatgtactatgca 808
|||||||||||||||||||||||||
Sbjct: 558 aaacagcttgtacatgtactatgca 582
>29794.m003344 protein phosphatase pp2a regulatory subunit B, putative
Length = 1542
Score = 424 bits (214), Expect = e-118
Identities = 535/642 (83%)
Strand = Plus / Plus
Query: 1 tgatggtgaaacctttatatcggctgatgacctgcgaatcaacctttggaacttggaaat 60
|||||||||||| ||| |||| |||||||| |||||||| || |||||||| ||||||||
Sbjct: 732 tgatggtgaaacatttgtatctgctgatgatctgcgaataaatctttggaatttggaaat 791
Query: 61 tagcaatcaaagtttcaatattgttgatgtaaagccagcaaatatggaggatctaactga 120
|||||| || |||||||| |||||| || | ||||| || ||||| ||||| |||||
Sbjct: 792 tagcaaccagagtttcaacattgttaatttgaagcctaacaacatggaagatctgactga 851
Query: 121 ggttataacatctgcagaattccaccccaaccactgcaatatgttagcatatagcagttc 180
||| || || || |||||||| ||||| || || |||||||| || ||||| || ||
Sbjct: 852 ggtgattacttcagcagaatttcacccttctcattgtaatatgttggcgtatagtagctc 911
Query: 181 gagaggctcaatccgactaattgatttgcgacaatcagctttatgtgactctcatgccaa 240
| | ||||||| || | |||||| |||| ||||| ||| ||||||| ||||| |||
Sbjct: 912 aaaaagctcaattcgtttgattgatatgcggcaatctgctctatgtgatactcatagcaa 971
Query: 241 attgtttgaggaacaggaggcaccaggttctagatcatttttcacagagataattgcttc 300
|| |||||||||||| || | || ||||| || || |||||||| ||||||||||| ||
Sbjct: 972 atcgtttgaggaacaagaagtgcctggttcgaggtcctttttcacggagataattgcctc 1031
Query: 301 aatctcagatattaaatttgctaaggatggaaggcatattcttagtcgtgattacatgac 360
||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 1032 aatctcagatattaagtttgccaaggatggaaggcatatacttagtcgtgattacatgaa 1091
Query: 361 tcttaagttatgggacatcaatatggattcaggtccagttgcaaccttccaggttcatga 420
||| ||||||||||| || ||||||||||| || ||||||||| ||||||| ||||||||
Sbjct: 1092 tctcaagttatgggatataaatatggattctgggccagttgcatccttccaagttcatga 1151
Query: 421 atatttaagacctaagttatgtgatttgtatgaaaatgattcaatcttcgataaattcga 480
||| | || |||||| | || |||||||||||||||||||| ||||| |||||||| ||
Sbjct: 1152 atacctgaggcctaagctttgcgatttgtatgaaaatgattccatctttgataaatttga 1211
Query: 481 gtgttgtttgagcggtgatggattgcgagtggcaaccgggtcttacagcaatctgttccg 540
||||||| | || || |||||||||||||||||||| || || ||||||||||| |||||
Sbjct: 1212 gtgttgtctaagtggagatggattgcgagtggcaactggttcctacagcaatcttttccg 1271
Query: 541 tgtgtttggttgtgcccctggaagcactgaagaaacaactttggaagccagcaaaaatcc 600
||| ||||| ||| | || ||||| |||| |||||| || ||||||| |||||||||
Sbjct: 1272 tgtttttggctgttctgaaggtagcacagaagcaacaacattagaagccaccaaaaatcc 1331
Query: 601 aatgaggagacaagttcagaccccttcaaggccttccagatc 642
|||||||||||||||||| || || ||||||||||| |||||
Sbjct: 1332 aatgaggagacaagttcaaacaccatcaaggccttctagatc 1373
>30147.m013921 protein phosphatase pp2a regulatory subunit B,
putative
Length = 1521
Score = 52.0 bits (26), Expect = 5e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 99 caaatatggaggatctaactgaggttataacatctgcagaattcca 144
|||| ||||||||||| |||||||| |||||||| || ||||||||
Sbjct: 800 caaacatggaggatcttactgaggtcataacatcagctgaattcca 845