Jatropha Genome Database
- JcCA0304071.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0304071.10 - phase: 0 /pseudo/partial
(1842 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29912.m005585 Potassium channel AKT6, putative 783 0.0
29807.m000501 Potassium channel AKT1, putative 145 1e-33
>29912.m005585 Potassium channel AKT6, putative
Length = 2661
Score = 783 bits (395), Expect = 0.0
Identities = 818/959 (85%)
Strand = Plus / Plus
Query: 385 gttgctgagatgaaggccgagtactttcctccaaaagaagatgtgattttacagaatgaa 444
||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||
Sbjct: 1201 gttgctgagatgaaggcagagtactttcctcctagagaagatgtgattttacagaatgaa 1260
Query: 445 gcacccacagacatgtacatattggtcaccggtgctgtggaacttattgtgcaaaggaat 504
||||||||||||||||| ||||||||||| ||||||||||| ||| ||||| ||| ||||
Sbjct: 1261 gcacccacagacatgtatatattggtcactggtgctgtggatcttgttgtgaaaaagaat 1320
Query: 505 gggatagagcaggttgttggagaggcaaagacaggagatgttgttggtgaggttggtttg 564
|| ||||||||||||||||| ||||| ||||||||||| || |||||||| |||| |||
Sbjct: 1321 ggaatagagcaggttgttggtgaggcgaagacaggagaatttattggtgagattggcttg 1380
Query: 565 ctctgttacaggccacaaatgttcacagctcgtaccaaacgattgagtcaattgttgcgt 624
|||||||| ||||||||||||||||||| || |||||| |||||||||| || |||||
Sbjct: 1381 gtctgttaccggccacaaatgttcacagcacggaccaaaagattgagtcagctgctgcgt 1440
Query: 625 ctgaaccgcactgcatttttaaatattgtacaagcaaatgttggagatgggacgattatt 684
||||||| |||| |||||||||||||||||| ||||||||||||| |||||||| |||
Sbjct: 1441 atgaaccgtactgtatttttaaatattgtacagtcaaatgttggagacgggacgataatt 1500
Query: 685 atgaataatcttcttcagtatttgaaagagttgaaggatccaatgatggaaggagttttg 744
|| || |||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 1501 ataaacaatcttcttcagcatttgaaagagttgaaggatccaatgatggaaggagttcta 1560
Query: 745 acagacacagagcacatgctagctcgtgggagaatggacctgcctctttctttgtgcttc 804
|| |||||||||| ||||| ||||||||||||||||| ||||||||| |||| |||||
Sbjct: 1561 tcatacacagagcaaatgctggctcgtgggagaatggatctgcctcttactttatgcttt 1620
Query: 805 gcagctatgagaggcgatgacctattgttgcatcaattgcttaaaaggggtttagatcca 864
|| ||||||||||| ||||| || ||||||||||| || |||| | |||| |||||||||
Sbjct: 1621 gctgctatgagaggtgatgatctcttgttgcatcagttacttagacggggcttagatcca 1680
Query: 865 aatgaattggataacaatgggcgaactgcattgcatatagcagcttcaagtgggagcgag 924
||||| | ||||||||||| | |||||| |||||| | |||||||||| |||||| ||
Sbjct: 1681 aatgagtgggataacaatgagaaaactgccttgcattttgcagcttcaaatgggagtgat 1740
Query: 925 cattgtgttgtcctccttctagagtatggagcagatccaaacaagaaagattcagaaggc 984
|| ||||| | |||||||||||||| ||||||||||| |||| |||||||||||||||
Sbjct: 1741 cactgtgtaatgctccttctagagtacggagcagatcccaacagaaaagattcagaaggc 1800
Query: 985 aatattcctctttgggaagcattaatggggaatcatgaatctgttattaaacttctcgtc 1044
||| | || ||||||||||||||| |||| || ||||||||||| || |||| ||| |
Sbjct: 1801 aatgtgcccctttgggaagcattattgggaaagcatgaatctgtggttcaactgctctta 1860
Query: 1045 gacaatggtgcgaccttgtcttgcggtgatgtgagtcaatatgcattagctgccactgag 1104
||||| || || | ||| |||| | |||||| |||||| |||| | || |||| ||||
Sbjct: 1861 gacaacggagccagcttttcttctgcagatgtgggtcaatttgcactggcagccattgag 1920
Query: 1105 caaaacaacttggatttgctcaaggaaattgttaactatggcggtgatgtgacactgcgc 1164
||||| |||||||||||||||||||||||| || | ||| || ||||| |||| || |
Sbjct: 1921 caaaataacttggatttgctcaaggaaattacgaattgtgggggagatgtaacacagccc 1980
Query: 1165 acaagcactggaacaacagcacttcatgtggcaatatctggaggaaacactgaaattgtc 1224
||||| ||||||| | | |||||||| ||||| |||| |||||| |||||| ||
Sbjct: 1981 acaaggactggaattataccacttcattcagcaatttctgatggaaactttgaaatggtt 2040
Query: 1225 aagttccttttagagcagggagctgatgttgatatgccagatgcccacggatggacagca 1284
||||||||||| || || ||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 2041 aagttccttttggaccaaggagctgatgttgatatgccagatgtccatggatggacagca 2100
Query: 1285 aggagattagcagagcatcagggcattgaagaaattcaagctttggtccaaacaacgca 1343
||| || ||||| ||||||||| ||||||||||||||||||| ||| ||| |||||
Sbjct: 2101 agggctttggcagatcatcagggccatgaagaaattcaagctttgatccgaacgacgca 2159
Score = 293 bits (148), Expect = 2e-78
Identities = 223/248 (89%)
Strand = Plus / Plus
Query: 58 agagatactatccaagctgcatcaagttttgcacagaggaaccatctgcctcttcgcctg 117
||||| ||||| |||||||||||||||||||||||||||||||| || ||| ||||||||
Sbjct: 955 agagacactatacaagctgcatcaagttttgcacagaggaaccagcttcctgttcgcctg 1014
Query: 118 caggagcagatgcttgctcatttgagtttgaggtacagaactgattcggaaggtctgcat 177
|| || |||||| ||||||||||||| ||| |||||||||||||||||| || ||||||
Sbjct: 1015 caagaccagatgattgctcatttgagcctgaagtacagaactgattcggagggactgcat 1074
Query: 178 caacaagagactattgatgcacttccaaaggccattcgatcgagcatcgctagctatctc 237
|| |||||||| || || | ||||||||||||||||| || ||||| || ||||||||
Sbjct: 1075 cagcaagagacaatcaattcccttccaaaggccattcggtcaagcattgcaagctatctt 1134
Query: 238 ttttattcattggtagataaggtgtacttgtttcgaggggtatcaaatgacttacttttc 297
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1135 ttctattcattggtagataaggtgtacttgtttcgaggggtatcaaatgacttacttttc 1194
Query: 298 caattggt 305
||||||||
Sbjct: 1195 caattggt 1202
Score = 174 bits (88), Expect = 1e-42
Identities = 174/200 (87%), Gaps = 2/200 (1%)
Strand = Plus / Plus
Query: 1623 ctatccagctagagtgactattagttgcccagaaaaaggtgaagttgaaggaaagcttgt 1682
||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||
Sbjct: 2436 ctatccagctagagtgactatcagttgcccagaaaaaggtgcagttgatggaaagcttgt 2495
Query: 1683 tctattgccaaaatcaattcaagaactactagatattggtgtgaa-aaatttcgaattct 1741
|||||||||||| ||| | |||||||||| |||||||||| || |||| | || || |
Sbjct: 2496 tctattgccaaagtcactagaagaactactggatattggtgccaagaaatatggatttgt 2555
Query: 1742 cagcaaccagaattcttaccaaagaaggggctgaaattgaggatatagagcttattagag 1801
|||||| |||||||| ||||||||| ||||||||||| ||||| ||||| |||||||
Sbjct: 2556 -tccaaccaaaattcttaacaaagaaggagctgaaattgaagatatcgagctcattagag 2614
Query: 1802 acggtgaccatcttgttctt 1821
| ||||| ||||||||||||
Sbjct: 2615 atggtgatcatcttgttctt 2634
>29807.m000501 Potassium channel AKT1, putative
Length = 2706
Score = 145 bits (73), Expect = 1e-33
Identities = 319/401 (79%)
Strand = Plus / Plus
Query: 391 gagatgaaggccgagtactttcctccaaaagaagatgtgattttacagaatgaagcaccc 450
|||||||| || ||||| || || || ||||||||||||||||| ||||||||||||||
Sbjct: 1186 gagatgaaagctgagtatttcccccccaaagaagatgtgattttgcagaatgaagcaccg 1245
Query: 451 acagacatgtacatattggtcaccggtgctgtggaacttattgtgcaaaggaatgggata 510
|||||| | || ||| | ||||| ||||||||||| || |||| | | |||||
Sbjct: 1246 acagacttctatatactcgtcactggtgctgtggatctacttgtttacaaaaatggagct 1305
Query: 511 gagcaggttgttggagaggcaaagacaggagatgttgttggtgaggttggtttgctctgt 570
|| ||||||||||| ||||||| || || ||| || |||||| |||| |||| ||
Sbjct: 1306 gaacaggttgttgggcaggcaaaaactggtgatctttgcggtgagattggggtgctttgc 1365
Query: 571 tacaggccacaaatgttcacagctcgtaccaaacgattgagtcaattgttgcgtctgaac 630
|| ||||||||| | || |||| || |||||| || |||| || | | |||||||||
Sbjct: 1366 tataggccacaactttttacagtacggaccaaaagactgagccagctactacgtctgaac 1425
Query: 631 cgcactgcatttttaaatattgtacaagcaaatgttggagatgggacgattattatgaat 690
|| ||| |||||||||| ||||| || |||||| ||||||||||||| || || ||||||
Sbjct: 1426 cgtactacatttttaaacattgttcaggcaaatattggagatgggaccataatcatgaat 1485
Query: 691 aatcttcttcagtatttgaaagagttgaaggatccaatgatggaaggagttttgacagac 750
||||| |||||| |||||||||| ||||||||||| ||||||||||||||| ||
Sbjct: 1486 aatctccttcagcatttgaaagaacaaaaggatccaataatggaaggagttttggtggag 1545
Query: 751 acagagcacatgctagctcgtgggagaatggacctgcctct 791
|||||| ||| |||||||||||| || ||||||| |||||
Sbjct: 1546 acagagaacacgctagctcgtggtcgactggacctacctct 1586
Score = 109 bits (55), Expect = 6e-23
Identities = 139/167 (83%)
Strand = Plus / Plus
Query: 58 agagatactatccaagctgcatcaagttttgcacagaggaaccatctgcctcttcgcctg 117
|||||||| || ||||| || ||||||||||||||||||||||| || ||||||||||||
Sbjct: 934 agagataccatacaagcagcttcaagttttgcacagaggaaccaacttcctcttcgcctg 993
Query: 118 caggagcagatgcttgctcatttgagtttgaggtacagaactgattcggaaggtctgcat 177
|| || ||||||||||| ||| || |||||| || ||| || ||||| || || |||||
Sbjct: 994 caagatcagatgcttgcacatctgtgtttgaagttcaggacagattcagagggactgcag 1053
Query: 178 caacaagagactattgatgcacttccaaaggccattcgatcgagcat 224
|| ||||||||| | ||| | |||||||| || ||||| || |||||
Sbjct: 1054 cagcaagagactctcgattcccttccaaaagcaattcgttcaagcat 1100
Score = 56.0 bits (28), Expect = 8e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1100 ctgagcaaaacaacttggatttgctcaaggaaattg 1135
|||| |||||||||||| ||||||||||||||||||
Sbjct: 1895 ctgaacaaaacaacttgaatttgctcaaggaaattg 1930