Jatropha Genome Database

JcCA0302361.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0302361.30 - phase: 0 
         (597 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008752 conserved hypothetical protein                          355   2e-97

>30128.m008752 conserved hypothetical protein
          Length = 705

 Score =  355 bits (179), Expect = 2e-97
 Identities = 398/471 (84%)
 Strand = Plus / Plus

                                                                       
Query: 122 tgccagctgaagatgatgcccaacctgttgaaaaagttgggccatctatggtctttctcc 181
           ||||| |||||| ||||||| |||| ||||||||||| ||||| |||||||| | |||| 
Sbjct: 227 tgccaactgaagctgatgccaaaccagttgaaaaagtcgggccttctatggtatatctcg 286

                                                                       
Query: 182 caccaagcacaactcaaaaggaacgggataatgtattggcgtctgccaaaggtgcagttg 241
              | | |||||||| ||| ||| |||| ||| ||||||  ||||||||| |||||||||
Sbjct: 287 attctaacacaactcgaaaagaatgggacaatatattggtctctgccaaaagtgcagttg 346

                                                                       
Query: 242 ccctgtctgggagtgcagctatgggaatggtgggaccggctttaggattaatggacattg 301
           |  || |||||||||||||||||||||||||||||||   | ||||||||||||||||||
Sbjct: 347 cattgactgggagtgcagctatgggaatggtgggaccaattataggattaatggacattg 406

                                                                       
Query: 302 gggaatctgatgatgcctacctctttagagtctccctccctggggtagcaagagatgaaa 361
           | |||  ||||||||||||| | ||| | ||||||||||||||||||||||   || |||
Sbjct: 407 gagaaagtgatgatgcctacttatttcgtgtctccctccctggggtagcaaacaataaaa 466

                                                                       
Query: 362 aggaatttagttgtgacatcgaaccagatggaacgatactaataaagggagtgacgacca 421
           |||||||||||||||| || ||||| || |||| |||||  |||| |||||| || ||||
Sbjct: 467 aggaatttagttgtgatattgaacctgacggaaagatacatataaggggagtaacaacca 526

                                                                       
Query: 422 ctggtgagaaaacagtgtgcaagaattcccaaatcttcaggatgcaaacacaaaacctat 481
           |||| ||| ||| |||||||||||| || ||||| || ||||||||||| |||||  |||
Sbjct: 527 ctggcgagcaaatagtgtgcaagaactcgcaaatatttaggatgcaaactcaaaatttat 586

                                                                       
Query: 482 gtccaccgggtcatttctccatcacattccagttgcccggtccggttaatcacaagcagt 541
           | ||||| || ||||||||||||||||| ||  | || ||||| ||| ||||||| ||||
Sbjct: 587 gcccaccaggccatttctccatcacatttcatctacctggtccagttgatcacaaacagt 646

                                                              
Query: 542 ttagaggtcatttcgggaatgatggaatgcttgagggaattgtgaagaaaa 592
           ||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 647 ttagaggccatttcgggaacgatggaatgcttgagggaattgtgaagaaaa 697