Jatropha Genome Database

JcCA0302361.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0302361.10 - phase: 0 /partial
         (453 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008756 protein binding protein, putative                       309   8e-84

>30128.m008756 protein binding protein, putative
          Length = 1323

 Score =  309 bits (156), Expect = 8e-84
 Identities = 315/368 (85%)
 Strand = Plus / Plus

                                                                       
Query: 86  tttttccatctaaagtgagtatggttgctgaagctcttgaaagaagtaacaaaaattgga 145
           |||||||| | ||||||||| |||||||||||||| |||||||||| ||| | |||||||
Sbjct: 119 tttttccagccaaagtgagtctggttgctgaagcttttgaaagaagaaaccagaattgga 178

                                                                       
Query: 146 ttgttagaacaaaagttgcaagtgatttgatcatacaagttggggattccatctttcagt 205
           |||||    ||||||||||||||||||||| ||||||| |||| |||||  |||||||||
Sbjct: 179 ttgttcatgcaaaagttgcaagtgatttgaccatacaaattggtgattcagtctttcagt 238

                                                                       
Query: 206 tacataaggttcctatggtatcaagaagtgggtatttgaacagattaatattccaaagaa 265
           |||||||| |||| ||||||||||||||||| |  || || |||||| ||||||| ||||
Sbjct: 239 tacataagcttccaatggtatcaagaagtggattcttaaatagattagtattccagagaa 298

                                                                       
Query: 266 taagcattggagagaaaaatcctatttctaagattcaaatagacaattttccaggaggag 325
            ||||  ||| |||||||||  | |  ||||||||||||||||||||||||| || ||||
Sbjct: 299 gaagctatggggagaaaaataatgtccctaagattcaaatagacaattttccgggtggag 358

                                                                       
Query: 326 ctgaaatctttgaattagcggtcaaattctgctacggatggaaaattgaattgacagcag 385
           |||||||||||||  ||| ||| ||||||||||| ||||||||  ||||  |||||||||
Sbjct: 359 ctgaaatctttgagatagtggtgaaattctgctatggatggaatgttgatctgacagcag 418

                                                                       
Query: 386 ccaacattgctccagtatattgtgctgcaaattttttagaaatgagtgatgatcttgaac 445
           |||| || ||||| | ||||||||||||| ||||  | ||||||||||||||||||||||
Sbjct: 419 ccaatatcgctcctgcatattgtgctgcacatttcctggaaatgagtgatgatcttgaac 478

                   
Query: 446 aaggaaat 453
           ||||||||
Sbjct: 479 aaggaaat 486