Jatropha Genome Database

JcCA0302221.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0302221.20 - phase: 0 /partial
         (507 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30041.m000240 isopropylmalate synthase, putative                      337   4e-92

>30041.m000240 isopropylmalate synthase, putative
          Length = 1899

 Score =  337 bits (170), Expect = 4e-92
 Identities = 375/442 (84%), Gaps = 6/442 (1%)
 Strand = Plus / Plus

                                                                        
Query: 8    agagagttactgatgctgacctgttagcattagtatcagatgaagtttttcagccagaaa 67
            ||||||||||||||||||||||| ||||||| || |||||||||||||| ||||||||||
Sbjct: 1394 agagagttactgatgctgacctgatagcattggtgtcagatgaagttttccagccagaaa 1453

                                                                        
Query: 68   ttgtatggcagcttggtgatctgcagattacttgcggaacacttggtctctctactgcaa 127
            |||| ||| ||||||||||| ||||| | || || |||||||||||||| || |||||||
Sbjct: 1454 ttgtttggaagcttggtgatttgcaggtcacatgtggaacacttggtctatccactgcaa 1513

                                                                        
Query: 128  ctgttaagctcattgatgccaatggtgaacagcacattgcatgttcagttggaactgggc 187
            | |||||||||||| ||||  |||||||| ||||||| |||||||| |||||  ||||||
Sbjct: 1514 cagttaagctcattaatgctgatggtgaagagcacatagcatgttcggttggttctgggc 1573

                                                                        
Query: 188  cagtagatgcagcatacaaggcagttgatctcattgtgaaggaacctgttgaactccttg 247
            | |||||||||| ||||||||| ||||||||||||||||||||||| |||||||| || |
Sbjct: 1574 ctgtagatgcaggatacaaggctgttgatctcattgtgaaggaaccagttgaacttctgg 1633

                                                                        
Query: 248  aatactcaatgactgctgttactggaggcattgatgctatagccacaacccgagttttaa 307
            ||||||| ||||  |||||||| | |||||||||||| |||||||| ||||| ||| |||
Sbjct: 1634 aatactccatgaacgctgttacagaaggcattgatgcaatagccaccacccgcgttctaa 1693

                                                                        
Query: 308  tttgt---ggtgacaaccataaa---attgatgctataacaggtgaaccatctcgacgga 361
            || ||   |  ||||| || | |   |   ||||| ||||||| |||||||  | |||||
Sbjct: 1694 ttcgtagggaggacaatcacacatctacgcatgctttaacaggcgaaccattccaacgga 1753

                                                                        
Query: 362  cattcagtggatctggtgctggaatggacattgttgtttcaagtgtgaaggcctatattg 421
            |||| ||||||||||||||||||||||| ||||| ||||| || |||||||| ||| |||
Sbjct: 1754 catttagtggatctggtgctggaatggatattgtggtttctagcgtgaaggcgtatgttg 1813

                                  
Query: 422  gtgcattgaataagatgttagc 443
            | ||| | ||||||||||||||
Sbjct: 1814 gagcactaaataagatgttagc 1835