Jatropha Genome Database
- JcCA0302101.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0302101.20 + phase: 0 /partial
(738 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30027.m000845 Ubiquitin carboxyl-terminal hydrolase, putative 700 0.0
>30027.m000845 Ubiquitin carboxyl-terminal hydrolase, putative
Length = 2376
Score = 700 bits (353), Expect = 0.0
Identities = 625/718 (87%)
Strand = Plus / Plus
Query: 1 atggagttgctccgatccaatctctctcgggttcgaatccccgaacccaccaatcgcatc 60
|||||| |||||||||||||| | ||||| ||||| || || ||||||||||||||||||
Sbjct: 1 atggagctgctccgatccaatttatctcgtgttcggattccagaacccaccaatcgcatc 60
Query: 61 tacaaggacgaatgctgcatctcattcgatactccaagatctgaaggtggattatatgtt 120
| || | |||||||||||||| ||||| ||||| |||||||||||||| | | | ||
Sbjct: 61 tttaaacatgaatgctgcatctctttcgacactcctagatctgaaggtgggctgtttatt 120
Query: 121 gacatgaacacatttcttgcattcgggaaagactctgtgggttggaactatgagaagact 180
||||||||||||||||||||||| ||||| |||| || || ||||||||||||||||||
Sbjct: 121 gacatgaacacatttcttgcatttgggaaggactgcgttggctggaactatgagaagact 180
Query: 181 ggtgatgcagtttatttgcacataaagcaaacaagaaagttggttcctgaggacaggcct 240
|| | | ||||||||||||||||| ||||| |||| || ||||||| || || |||
Sbjct: 181 ggaaaccctgtttatttgcacataaaacaaacggcaaagctgattcctgaagatagacct 240
Query: 241 tcnnnnnnnccaactttgttggctataggtgttgaagggggatttgacaacaatgaacct 300
|| || ||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 241 tcaaaaaagccgactttattggctataggtattgaagggggatttgacaacaatgaacct 300
Query: 301 gaatatgaagaaatttacagcatagtcatattgcctgattatgttacttttccatttcct 360
|| |||||||||| | |||| ||||| |||||||||||||||||||||||| |||||||
Sbjct: 301 gactatgaagaaactcacagtatagtaatattgcctgattatgttacttttgaatttcct 360
Query: 361 tctgtagatttgcctgagaaggtaaggctggcagttgatgccatcttaatggcagaaagt 420
||||| || ||||| ||||||||||| |||||| |||||||||||||||||| ||| ||
Sbjct: 361 tctgttgagttgccagagaaggtaagattggcagctgatgccatcttaatggctgaaggt 420
Query: 421 gcagaacggaaagaacagcttgctgcttggacagctgataaaaagcaaattagtgcatat 480
||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 421 gcagaacggaaggaacagcttgctgcttggacagctgataagaagcaaattagttcatat 480
Query: 481 gcaatgaatttaccacaaattgacaatggtgttattgttcctccatctggatggaaatgt 540
||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 481 gcaatgaatttacaacagattgacaatggtgttattgttcctccatctgggtggaaatgt 540
Query: 541 gcgaagtgtgagaaaagagaaaatttgtggttgaatcttagtgatggaacgatcctttgt 600
||||||| || |||| ||| ||| ||||||||||||||| |||||||| ||||||||||
Sbjct: 541 tcgaagtgcgataaaaaagagaatctgtggttgaatcttactgatggaatgatcctttgt 600
Query: 601 ggtcgaagaaattgggatggaagcggcggaaacaatcatgccattgaacattacaaggag 660
|| || | ||||||||||||||| ||||| ||||| ||||| |||||||| || ||||||
Sbjct: 601 ggacggaaaaattgggatggaagtggcggcaacaaccatgctattgaacactataaggag 660
Query: 661 acaagttaccctcttgctgtaaaacttgggacaattactgctgatttagaagcagcag 718
||| |||||||||||||| |||| ||||||||||||||||||||| | ||||||||||
Sbjct: 661 acaggttaccctcttgctataaagcttgggacaattactgctgatctggaagcagcag 718