Jatropha Genome Database
- JcCA0299751.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0299751.20 + phase: 0 /partial
(733 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29830.m001441 undecaprenyl diphosphate synthase, putative 426 e-119
28565.m000331 undecaprenyl diphosphate synthase, putative 174 5e-43
28565.m000330 undecaprenyl diphosphate synthase, putative 161 7e-39
28565.m000328 undecaprenyl diphosphate synthase, putative 145 4e-34
>29830.m001441 undecaprenyl diphosphate synthase, putative
Length = 1146
Score = 426 bits (215), Expect = e-119
Identities = 434/507 (85%)
Strand = Plus / Plus
Query: 76 atatgcttatttcgcattctatccatgggacccatccccagccattttgcctttataatg 135
|||||| | ||||| |||||||| ||||||| ||||||| ||| ||||||| || |||
Sbjct: 64 atatgcatgtttcgtattctatctgtgggaccaatccccaatcatattgccttcattatg 123
Query: 136 gatggaaatcggaggtatgctaagaaggggaacttgaaactaggtgctggtcatcgggct 195
||||||||||||||||| |||||||||| |||| ||||| ||| ||||||||| | |||
Sbjct: 124 gatggaaatcggaggtacgctaagaaggagaacatgaaagaaggggctggtcatagagct 183
Query: 196 ggatttgagtctcttatatccatacttaagtactgctatgaattgggagtaaagtatgta 255
|||||| |||||||||| |||||||||||||| ||||||||||| ||||||||||||
Sbjct: 184 ggattttcagctcttatatctatacttaagtactgttatgaattgggggtaaagtatgta 243
Query: 256 actatttatgcctttagcattgataattttaagaggcggccagatgaggttaaggatctg 315
||| |||||||||||||||||||||||||||| |||||||||||||||||| |||| ||
Sbjct: 244 actgtttatgcctttagcattgataattttaaaaggcggccagatgaggttcaggacctt 303
Query: 316 atggatctgatgctagaaaagattgacgagttgcttaaggaagaaagcatggcgaagcaa 375
|||||||| ||||||||||||||||| |||||||| || |||||||| || | ||| |||
Sbjct: 304 atggatcttatgctagaaaagattgaagagttgctcaaagaagaaagtattgtgaaccaa 363
Query: 376 tatggaatcagagtatattttataggtaatttgaaacttttgagtgaaaatgtccggatt 435
|||||||||||||| ||||||||||||||||||| ||| | | ||| |||| |||||
Sbjct: 364 tatggaatcagagtgtattttataggtaatttgacactgctaaatgagcctgtcaggatt 423
Query: 436 gctgccgaaaaggttatgagggctactgctaataacaccaagtgtacccttttaatctgt 495
|| ||||||||||||||||||||||| || |||||||| || ||||| ||||||||||
Sbjct: 424 gcagccgaaaaggttatgagggctaccgccaataacacaaaatgtacttttttaatctgc 483
Query: 496 ttagcttatacctcacgtgatgagattttacatgctgttcaagattcttgtaaaaataaa 555
| || ||||| ||| ||||||||||| |||||||||||||||| || |||||| |||
Sbjct: 484 attgcctatacttcatgtgatgagattgtacatgctgttcaagaatcatgtaaatttaag 543
Query: 556 tgggaggaaattcaaccattgagcttt 582
|| |||| |||||||||||| ||||
Sbjct: 544 cggcaggagtttcaaccattgaccttt 570
>28565.m000331 undecaprenyl diphosphate synthase, putative
Length = 1092
Score = 174 bits (88), Expect = 5e-43
Identities = 256/312 (82%)
Strand = Plus / Plus
Query: 99 catgggacccatccccagccattttgcctttataatggatggaaatcggaggtatgctaa 158
|||||| ||||| ||||| ||| || | || |||||||||||||||||||||| | ||||
Sbjct: 63 catgggtcccattcccagtcatctttcgttcataatggatggaaatcggaggtttactaa 122
Query: 159 gaaggggaacttgaaactaggtgctggtcatcgggctggatttgagtctcttatatccat 218
||||| |||| |||||| ||| |||||| || ||||||| ||| ||||||| |||||
Sbjct: 123 gaaggagaacctgaaaccaggggctggttatagggctgggtttttagctcttatgtccat 182
Query: 219 acttaagtactgctatgaattgggagtaaagtatgtaactatttatgcctttagcattga 278
||||||||||||||||| ||||| || ||| |||||||||||| ||||||| |||||||
Sbjct: 183 gcttaagtactgctatgagttgggggtgaagcatgtaactatttttgcctttggcattga 242
Query: 279 taattttaagaggcggccagatgaggttaaggatctgatggatctgatgctagaaaagat 338
||||||||| ||||| || ||||||||| | | | ||||||||||| || || ||||
Sbjct: 243 taattttaaaaggcgacctgatgaggttcggtttataatggatctgatactggagaagac 302
Query: 339 tgacgagttgcttaaggaagaaagcatggcgaagcaatatggaatcagagtatattttat 398
| | |||||| ||||||||||| || | | |||||||| || |||||| |||||||
Sbjct: 303 tctggggttgctcaaggaagaaagtatagtccatcaatatggtattagagtacattttat 362
Query: 399 aggtaatttgaa 410
|||||||||||
Sbjct: 363 tggtaatttgaa 374
>28565.m000330 undecaprenyl diphosphate synthase, putative
Length = 1113
Score = 161 bits (81), Expect = 7e-39
Identities = 231/281 (82%)
Strand = Plus / Plus
Query: 130 ataatggatggaaatcggaggtatgctaagaaggggaacttgaaactaggtgctggtcat 189
|||||||||||||||||||||| | ||||||||| |||| |||| | ||| |||||| ||
Sbjct: 118 ataatggatggaaatcggaggtttactaagaaggagaacctgaagccaggggctggttat 177
Query: 190 cgggctggatttgagtctcttatatccatacttaagtactgctatgaattgggagtaaag 249
||||||| ||| ||||||| ||||| ||||||||||||||||| ||||| || |||
Sbjct: 178 agggctgggttttcagctcttatgtccatgcttaagtactgctatgagttgggggtgaag 237
Query: 250 tatgtaactatttatgcctttagcattgataattttaagaggcggccagatgaggttaag 309
|||||||| |||| ||||||| |||||||||||||||| ||||| | ||||||||| ||
Sbjct: 238 tatgtaaccatttttgcctttggcattgataattttaaaaggcgatctgatgaggttcag 297
Query: 310 gatctgatggatctgatgctagaaaagattgacgagttgcttaaggaagaaagcatggcg 369
| | | |||||||| ||||| || |||| | | | |||| |||||||||||||| |
Sbjct: 298 gttataatggatctaatgctggagaagactttggggatgctcaaggaagaaagcatagtc 357
Query: 370 aagcaatatggaatcagagtatattttataggtaatttgaa 410
| || ||||| | |||||||||||||| |||||||||||
Sbjct: 358 catcagtatggtgttagagtatattttattggtaatttgaa 398
>28565.m000328 undecaprenyl diphosphate synthase, putative
Length = 996
Score = 145 bits (73), Expect = 4e-34
Identities = 185/217 (85%), Gaps = 4/217 (1%)
Strand = Plus / Plus
Query: 78 atgcttatttcgcattctatccatgggacccatccccagccattttgcctttataatgga 137
|||| ||||| || |||| |||||||| || |||||| | ||| || ||||| |||||||
Sbjct: 42 atgcatatttggcgttctgtccatgggtcctatccccggtcatctttcctttctaatgga 101
Query: 138 tggaaatcggaggtatgctaagaaggggaa-cttgaaactaggtgctggtcatcgggctg 196
|||||||||||||| ||||||||||| ||| || ||||| ||| ||||||||| |||||
Sbjct: 102 tggaaatcggaggtttgctaagaaggagaatctggaaac-aggggctggtcataaggctg 160
Query: 197 gat-ttgagtctcttatatccatacttaagtactgctatgaattgggagtaaagtatgta 255
| | || || |||||||| |||||||||||||||||||||| ||| | || |||||||||
Sbjct: 161 ggtcttcag-ctcttataaccatacttaagtactgctatgatttgagggtgaagtatgta 219
Query: 256 actatttatgcctttagcattgataattttaagaggc 292
||| | ||||||||||||||||| |||||||| ||||
Sbjct: 220 actgtctatgcctttagcattgagaattttaacaggc 256