Jatropha Genome Database

JcCA0299751.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0299751.10 - phase: 1 /pseudo/partial
         (299 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m011235 potassium channel tetramerization domain-containin...    76   1e-13

>30190.m011235 potassium channel tetramerization
           domain-containingprotein, putative
          Length = 1425

 Score = 75.8 bits (38), Expect = 1e-13
 Identities = 95/114 (83%)
 Strand = Plus / Plus

                                                                       
Query: 55  tctctcttagcgattccccgaaatctagctgctgcgggagccaccgatttctcgggtatg 114
           ||||| ||||| ||| ||| |||| |||| ||||| |||||||||||||| || || |||
Sbjct: 544 tctcttttagcaatttccccaaatttagcagctgctggagccaccgatttttccgggatg 603

                                                                 
Query: 115 caaattctcgatcttgaaaagatttgtgttagggacagtctgtgttgagaaaac 168
           |||||||| ||||||||||||  || |||||| |  | ||||||||| ||||||
Sbjct: 604 caaattcttgatcttgaaaagggttttgttagagcaactctgtgttgggaaaac 657