Jatropha Genome Database
- JcCA0299231.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0299231.10 - phase: 0 /partial
(1695 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29647.m002047 stromal antigen, putative 1744 0.0
27942.m000159 stromal antigen, putative 611 e-174
>29647.m002047 stromal antigen, putative
Length = 3321
Score = 1744 bits (880), Expect = 0.0
Identities = 1455/1646 (88%), Gaps = 3/1646 (0%)
Strand = Plus / Plus
Query: 1 gattggaaatgcattatttccattctcttggatgagaatccacaggttgagcttactgat 60
|||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 1417 gattggaagtgcattatttccatgctcttggatgagaatcctttggttgagcttactgat 1476
Query: 61 gatgatgcaacaaatttggttagacttctttttgcatctgtccggaaggctgtaggagag 120
||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 1477 gatgacgcaacaaatttggttagacttctttttgcatctgtcaggaaggctgtaggggag 1536
Query: 121 aggatagttccagcttctgataatcgaaagcaatattataataaagctcaaaaagaaata 180
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||
Sbjct: 1537 aggatagttccagcttctgataatcgaaagcaatattacaataaagctcagaaagaagta 1596
Query: 181 tttgaaaacaatagaagagacataacaattgccatgatgaagaacttccctctcctttta 240
|||||||||||||||| ||||||||||||||| ||||||||||||| || ||||| ||
Sbjct: 1597 tttgaaaacaatagaaaagacataacaattgcaatgatgaagaactatccactcctccta 1656
Query: 241 cgtaaattcaccgctgataaagcaaaagtgccatcactggttgagattattgtgcacatg 300
|| ||||||| ||||| ||||||||| | |||||| |||||||||||||||||||||||
Sbjct: 1657 cgcaaattcatggctgacaaagcaaaaataccatcattggttgagattattgtgcacatg 1716
Query: 301 aacctggagctttattccctaaagagacaagaacagaatttcaaaaatgttcttcagctc 360
||||| ||||||||||| || ||||||||||| ||||||||||||||||||||||||||
Sbjct: 1717 aacctagagctttattctctgaagagacaagagcagaatttcaaaaatgttcttcagctg 1776
Query: 361 ataaaagaagcgttttttaaacatggtgagaaggaggcattgagatcttgtgtaaaggct 420
|| |||||| | |||||||||||||| |||||||||||| ||||||||||||| |||||
Sbjct: 1777 atgaaagaatcattttttaaacatggggagaaggaggcactgagatcttgtgtgaaggcc 1836
Query: 421 attacattttgttccactgagagtcaaggagagcttaaagattttgcctgtaataaatta 480
||| |||||||| || ||||||||||||||| | ||||||||||| |||||||||||
Sbjct: 1837 attttgttttgttctacagagagtcaaggagagttgaaagattttgctggtaataaatta 1896
Query: 481 aagaatcttgaagatgagctaattgctaaacttaaatctgcattgaaagaagcagcggat 540
||||||||||||||||||||||||||||| |||||||||||| |||||||||||| || |
Sbjct: 1897 aagaatcttgaagatgagctaattgctaagcttaaatctgcaatgaaagaagcagtgggt 1956
Query: 541 ggtgatgaatactctcttcttgtgaatttgaaaaggttatatgagcttcagttatcaagg 600
||||||||||| ||||||||||| ||||||||||||||||| |||||||| | ||||
Sbjct: 1957 ggtgatgaatattctcttcttgtcaatttgaaaaggttatacgagcttcaactgtcaaaa 2016
Query: 601 gctgtacctatagagagtttgtatgatgatattgttagaattctccactatttcagaaat 660
|||||||| ||||||||| | | ||| ||||| || | || ||||| ||||||||||
Sbjct: 2017 gctgtacccatagagagtatctttgaagatatagtcaaggttatccacagtttcagaaat 2076
Query: 661 gtggatgatgaggttgtcagttttctgcttctcaacatgtatttgcatgttgcatggtct 720
||||||||||| ||||||||||||||||||||||| |||||| ||||||| ||||||||
Sbjct: 2077 gtggatgatgacgttgtcagttttctgcttctcaatatgtatctgcatgtagcatggtcg 2136
Query: 721 ctgcagtcaattgtgaacagcgaaactgtctctgaagcacagttgtcctctctactttca 780
|||||||| |||||||| || |||||| ||||||| |||||||| ||||| || |||||
Sbjct: 2137 ctgcagtctattgtgaatagtgaaactatctctgaggcacagttatcctccctgctttct 2196
Query: 781 aaacgcaatgtcttgtttgaggaacttgagtactttcttattaccccttccaatgaagag 840
||||||||| ||||||||||||||||||||||||||||| || ||||| | ||||
Sbjct: 2197 aaacgcaatatcttgtttgaggaacttgagtactttcttgggacaccttcagaagaagca 2256
Query: 841 agagttagtaaatatgctaatcagctagcttgcagagtctgtattatacttgcagaagca 900
| ||||| || || | ||||| ||||||||||| || ||||||||||||||||| ||
Sbjct: 2257 aaagttaacaagtactcgaatcacctagcttgcagggtttgtattatacttgcagaggcc 2316
Query: 901 tggtgtttgttcagacagacaaatttttcttcaacaaagctggaaagcttaggatattgt 960
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2317 tggtgtttgtttagacacacaaatttttcttcaacaaagctggaaagcttaggatgttgt 2376
Query: 961 cccgatacctctgttcttcaaaaattctggagactttctgaacagcagctcaacatttca 1020
|| || || |||||| |||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 2377 ccagacacatctgttgttcaaaaattctgggaactttgtgaacagcagctcaacatttca 2436
Query: 1021 gatgagaccgaagatgaagactcgaacaaagagtacattgaggagacaaatagagatgcg 1080
|||||||| || ||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 2437 gatgagacagatgatgaagacacaaacaaagagtacattgaggagacaaatagagatgca 2496
Query: 1081 gttgtgatagctgcagcaaagttggttgctagtggtacagtttccaaggaatatcttgct 1140
||| |||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||
Sbjct: 2497 gttatgatagctgcagcaaagttgattgctagtgatacagtttccaaggaatctcttgcc 2556
Query: 1141 cctgagatcatttctcattttgttatgcatggaactagtatagcagagattgtaaagcat 1200
|||| |||||||||||| ||||| ||||||||||| ||| | |||||||| || ||||||
Sbjct: 2557 cctgggatcatttctcactttgtgatgcatggaacaagtgttgcagagatagtcaagcat 2616
Query: 1201 cttatcacagttataaagaaaaaggatgatgatactaccaatatctttctagaagcattg 1260
|| |||| ||||||||||||| |||||||||| | ||||||| |||||||||||||||
Sbjct: 2617 ctactcactattataaagaaaaaagatgatgatatttccaatatttttctagaagcattg 2676
Query: 1261 aaaagggctcatcaccggcatttggaggaactttccagaagtgatgatggatccg---ta 1317
|||||||| ||||| ||||||||||||||||||| | ||||||||||||||| | ||
Sbjct: 2677 aaaagggcccatcaatggcatttggaggaactttctaaaagtgatgatggatcagtttta 2736
Query: 1318 ggaaaatcttttcaggagtgtaaggacctggctgctcgactctctgcaacattcatgggt 1377
||||||||||||| || || ||||||||||| |||||||| |||| ||||||||||||
Sbjct: 2737 cgaaaatcttttcaagactgcaaggacctggcagctcgactttctggcacattcatgggt 2796
Query: 1378 gctgctcggaacaagcatagagcagacatattaaaaattgtcaaggaaggtattgaatat 1437
||||||||||||||||||||||||||||| ||||||||| ||||||| || |||||||||
Sbjct: 2797 gctgctcggaacaagcatagagcagacatcttaaaaattatcaaggagggcattgaatat 2856
Query: 1438 gctttcattgattctccaaaacagctatcttttctggaaggtgcagtgctccattttgta 1497
||||||| || |||||||||||||||||||||||||| |||| |||| ||||||||
Sbjct: 2857 gctttcaaagacgctccaaaacagctatcttttctggaaagtgccatgctgcattttgtg 2916
Query: 1498 tccaaacttccgacatctgacgtcctggaaattctaaaagatgtccaaagtcggacagag 1557
||||||||||| ||| |||| ||| ||||||||||||||||||| |||||| | ||||||
Sbjct: 2917 tccaaacttccaacacctgatgtcttggaaattctaaaagatgttcaaagtagaacagag 2976
Query: 1558 aatgtaaatactgatgaagatcctagtggttggcgcccctatcacacattcgtggataac 1617
|||||||| |||||||||||||| ||||||||||| || || |||||| || || |||
Sbjct: 2977 aatgtaaacactgatgaagatcccagtggttggcgtccttacttcacatttgttgacaac 3036
Query: 1618 ttacgagaaaagtatgcaaagaatga 1643
|||||||| |||||||||||||||||
Sbjct: 3037 ttacgagagaagtatgcaaagaatga 3062
>27942.m000159 stromal antigen, putative
Length = 1371
Score = 611 bits (308), Expect = e-174
Identities = 568/654 (86%), Gaps = 3/654 (0%)
Strand = Plus / Plus
Query: 993 actttctgaacagcagctcaacatttcagatgagaccgaagatgaagactcgaacaaaga 1052
||||| |||||||||||||||||||||||||||||| || ||||||||| | ||||||||
Sbjct: 630 actttgtgaacagcagctcaacatttcagatgagacagatgatgaagacacaaacaaaga 689
Query: 1053 gtacattgaggagacaaatagagatgcggttgtgatagctgcagcaaagttggttgctag 1112
|||||||||| |||||||||||||||| ||| ||||||||||| |||||||| ||||||
Sbjct: 690 gtacattgagaagacaaatagagatgcagttatgatagctgcaacaaagttgactgctag 749
Query: 1113 tggtacagtttccaaggaatatcttgctcctgagatcatttctcattttgttatgcatgg 1172
|| ||||||||||||||||| |||||| |||| |||||||||||| ||||| ||||||||
Sbjct: 750 tgatacagtttccaaggaatctcttgcccctgggatcatttctcactttgtgatgcatgg 809
Query: 1173 aactagtatagcagagattgtaaagcatcttatcacagttataaagaaaaaggatgatga 1232
||| ||| | |||||||| || |||||||| |||| ||||||||||||| ||||||||
Sbjct: 810 aacaagtgttgcagagatagtcaagcatctactcactattataaagaaaaaagatgatga 869
Query: 1233 tactaccaatatctttctagaagcattgaaaagggctcatcaccggcatttggaggaact 1292
|| | ||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 870 tatttccaatatttttctagaagcattgaaaagggcccatcaatggcatttggaggaact 929
Query: 1293 ttccagaagtgatgatggatccg---taggaaaatcttttcaggagtgtaaggacctggc 1349
||| | |||||||| |||||| | || ||||||||||||| || || |||||||||||
Sbjct: 930 ttctaaaagtgatggtggatcagttatacgaaaatcttttcaagactgcaaggacctggc 989
Query: 1350 tgctcgactctctgcaacattcatgggtgctgctcggaacaagcatagagcagacatatt 1409
| |||||| |||| |||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 990 agatcgactttctggcacattcatgggtgctgcttggaacaagcatagagcagacatctt 1049
Query: 1410 aaaaattgtcaaggaaggtattgaatatgctttcattgattctccaaaacagctatcttt 1469
||||||| ||||||| || |||||||||||||||| | |||||||||||||||||||
Sbjct: 1050 aaaaattatcaaggagggcattgaatatgctttcaaaaacgctccaaaacagctatcttt 1109
Query: 1470 tctggaaggtgcagtgctccattttgtatccaaacttccgacatctgacgtcctggaaat 1529
||||||| |||| |||| |||||||| ||||||||||| ||| ||| || |||||||
Sbjct: 1110 tctggaaagtgccatgctgcattttgtgtccaaacttccaacacctgctgttttggaaat 1169
Query: 1530 tctaaaagatgtccaaagtcggacagagaatgtaaatactgatgaagatcctagtggttg 1589
|||||||||||| |||||| | ||| |||||||||| |||||||||||||| | ||||||
Sbjct: 1170 tctaaaagatgttcaaagtagaacaaagaatgtaaacactgatgaagatcccaatggttg 1229
Query: 1590 gcgcccctatcacacattcgtggataacttacgagaaaagtatgcaaagaatga 1643
||| || || |||||| || || ||||||||||| |||||||||||||||||
Sbjct: 1230 gcgtccttacttcacatttgttgacaacttacgagagaagtatgcaaagaatga 1283
Score = 563 bits (284), Expect = e-159
Identities = 497/568 (87%)
Strand = Plus / Plus
Query: 253 gctgataaagcaaaagtgccatcactggttgagattattgtgcacatgaacctggagctt 312
||||| ||||||||| | |||||| | |||||||||||||||||||||||||| ||||||
Sbjct: 4 gctgacaaagcaaaaataccatcatttgttgagattattgtgcacatgaacctagagctt 63
Query: 313 tattccctaaagagacaagaacagaatttcaaaaatgttcttcagctcataaaagaagcg 372
||||| |||||||||||||| |||||||||||||||||||||||||| || |||| | |
Sbjct: 64 tattctctaaagagacaagagcagaatttcaaaaatgttcttcagctgatgaaaggatca 123
Query: 373 ttttttaaacatggtgagaaggaggcattgagatcttgtgtaaaggctattacattttgt 432
|||||||||||||| |||||||||||| | ||||||||||| ||||| ||| ||||||
Sbjct: 124 ttttttaaacatggggagaaggaggcacttagatcttgtgtgaaggccattttgttttgt 183
Query: 433 tccactgagagtcaaggagagcttaaagattttgcctgtaataaattaaagaatcttgaa 492
|| || ||||||||||||||| | ||||||||||| |||||||||||||||||||||||
Sbjct: 184 tctacagagagtcaaggagagttgaaagattttgctggtaataaattaaagaatcttgaa 243
Query: 493 gatgagctaattgctaaacttaaatctgcattgaaagaagcagcggatggtgatgaatac 552
||||||||||||||||| |||||||||||| |||||||||||| || ||||||||||||
Sbjct: 244 gatgagctaattgctaagcttaaatctgcaatgaaagaagcagtgggtggtgatgaatat 303
Query: 553 tctcttcttgtgaatttgaaaaggttatatgagcttcagttatcaagggctgtacctata 612
| ||||||||| ||||| ||||||||||| |||||||| | |||| | |||||| |||
Sbjct: 304 tttcttcttgtaaatttaaaaaggttatacgagcttcaactgtcaaaagttgtacccata 363
Query: 613 gagagtttgtatgatgatattgttagaattctccactatttcagaaatgtggatgatgag 672
|||||| | | ||| ||||| || | || ||||| ||||||||||||||||||||||
Sbjct: 364 gagagtatctttgaagatatagtcaaggttatccacaatttcagaaatgtggatgatgac 423
Query: 673 gttgtcagttttctgcttctcaacatgtatttgcatgttgcatggtctctgcagtcaatt 732
||||||||||||||||||||||| |||||| ||||||| |||||||| |||||||| |||
Sbjct: 424 gttgtcagttttctgcttctcaatatgtatctgcatgtagcatggtcgctgcagtctatt 483
Query: 733 gtgaacagcgaaactgtctctgaagcacagttgtcctctctactttcaaaacgcaatgtc 792
||||| || |||||| ||||||| ||||| || ||||| || ||||| ||| ||||| ||
Sbjct: 484 gtgaatagtgaaactatctctgaggcacaattatcctccctgctttctaaatgcaatatc 543
Query: 793 ttgtttgaggaacttgagtactttctta 820
||||||||||||||||||||||||||||
Sbjct: 544 ttgtttgaggaacttgagtactttctta 571