Jatropha Genome Database
- JcCA0299151.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0299151.10 - phase: 0
(747 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29912.m005463 Transcriptional factor TINY, putative 280 1e-74
29794.m003381 Transcriptional factor TINY, putative 60 2e-08
>29912.m005463 Transcriptional factor TINY, putative
Length = 840
Score = 280 bits (141), Expect = 1e-74
Identities = 337/401 (84%), Gaps = 6/401 (1%)
Strand = Plus / Plus
Query: 55 tcttcttttccagctccttgttcgccatcttcatccgggttatctacaaaaccggttcgg 114
||||||| |||| |||||| ||| || || |||||||||||||| |||| ||||| ||
Sbjct: 73 tcttcttctccacctccttcttcaccttcctcatccgggttatccccaaacccggtacga 132
Query: 115 aaatccgactcggatgagaatgatcagagaaaacccaagagggctagagacagtagcaa- 173
||| ||| | |||| || ||| | |||||||||||||| |||||||||||||||||
Sbjct: 133 aaacccggcccggaagaaaat---cccagaaaacccaagagagctagagacagtagcaac 189
Query: 174 --gcatccggtgtatagaggagtgagaatgcgcacttggggcaaatgggtatcggagata 231
|||||| |||||| |||| || ||||| | || |||||||||||||||||||||||
Sbjct: 190 aagcatcctgtgtatcgaggggtccgaatgaggacatggggcaaatgggtatcggagatc 249
Query: 232 cgagagccccggaagaagaaccggatctggctcggcactttttccacacccgaaatggcg 291
||||| ||| | |||||||| |||||||||||||| ||||| || || || ||||||||
Sbjct: 250 cgagaacccagaaagaagaatcggatctggctcggtactttctcaactccagaaatggca 309
Query: 292 gcacgtgcacacgacgtggctgctttaaccattaaaggcaactcggcaatccttaacttc 351
||||||||||| ||||| || || |||| ||||||||||||||| || || |||||||||
Sbjct: 310 gcacgtgcacatgacgtcgcagccttaagcattaaaggcaactccgctattcttaacttc 369
Query: 352 cctgaactcgctgggtcgctgcctcgacccgcctctaactcgcctcgcgacgtccaagcc 411
||||||||||| || |||| || ||||| || || ||||||||||||||||| |||||
Sbjct: 370 cctgaactcgccggcacgcttccacgacctgcatcgaactcgcctcgcgacgtacaagct 429
Query: 412 gccgccgctaaagctgcttcaatggactttcacattagcaa 452
|||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 430 gccgccgctaaagctgcttcaatggactttaacattggcaa 470
Score = 61.9 bits (31), Expect = 5e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 700 gaaagtgtgataaatagtggttttgagcttttgttatgggaagatta 746
||||||||||| ||||||||||||||| |||| ||||||| ||||||
Sbjct: 793 gaaagtgtgattaatagtggttttgagttttttttatggggagatta 839
Score = 58.0 bits (29), Expect = 8e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 562 acgccagaagaactgagccagattgtggagttaccgagtctagaaatgagttt 614
||||||||||| ||||| ||||| |||||||| |||||||||| || ||||||
Sbjct: 607 acgccagaagagctgagtcagatagtggagttgccgagtctaggaacgagttt 659
>29794.m003381 Transcriptional factor TINY, putative
Length = 813
Score = 60.0 bits (30), Expect = 2e-08
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 277 acacccgaaatggcggcacgtgcacacgacgtggctgctttaaccattaaaggcaactcg 336
||||| |||||||| ||| | ||||| || || |||||||||| ||| ||||| |||||
Sbjct: 250 acacctgaaatggcagcaagggcacatgatgttgctgctttaagcatcaaaggaaactct 309
Query: 337 gcaatccttaacttccctgaactcgc 362
|| || |||||||||||||| |||||
Sbjct: 310 gccattcttaacttccctgagctcgc 335