Jatropha Genome Database
- JcCA0298381.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0298381.10 - phase: 0 /partial
(2913 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29794.m003447 myb, putative 682 0.0
>29794.m003447 myb, putative
Length = 3141
Score = 682 bits (344), Expect = 0.0
Identities = 680/792 (85%), Gaps = 8/792 (1%)
Strand = Plus / Plus
Query: 1 gatgagattttgcgcaaagctgttcagcgtttcaagggaaagaactggnnnnnnnttgct 60
|||||||||||| | || ||||||||||||||||| || ||||||||| |||||
Sbjct: 139 gatgagattttgaggaaggctgttcagcgtttcaaaggcaagaactggaaaaaaattgct 198
Query: 61 gagtgtttcaaggacaggactgatgtacaatgcctacataggtggcagaaggttttaaat 120
||||||||||||||| |||| |||||||||||||||||||| |||||||| || ||||||
Sbjct: 199 gagtgtttcaaggaccggacagatgtacaatgcctacatagatggcagaaagtcttaaat 258
Query: 121 ccggagcttgttaaaggtccatggtcgaaggaggaggatgaaataataattgaactggtc 180
|| ||||| |||||||| |||||||| |||||||||||||||| |||||| ||| ||||
Sbjct: 259 ccagagctggttaaaggcccatggtctaaggaggaggatgaaacaataatagaattggtg 318
Query: 181 aacaaatatgggccaaaaaagtggtccacaattgcccaacatttacctggacgaattgga 240
||||||||||| || ||||||||||| |||||||| || |||||||||||||| |||||
Sbjct: 319 aacaaatatggacctaaaaagtggtctacaattgcacagcatttacctggacgtattggg 378
Query: 241 aaacagtgcagagaaaggtggcataatcatcttaatccttcaataaataaagaggcatgg 300
|| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 379 aagcagtgcagggaaaggtggcataatcatcttaatccttcaataaacaaagaggcatgg 438
Query: 301 acccaacaggaggagttggccttgattcgtgctcatcagatttatgggaatagatgggca 360
|| || || || || ||||||||||||||||||||||||||||| ||||| || |||||
Sbjct: 439 acgcagcaagaagaattggccttgattcgtgctcatcagatttacgggaacaggtgggcg 498
Query: 361 gagctgacaaagttcttgcctggaaggacagacaatgctataaaaaatcactggaacagt 420
||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 499 gagttgacaaagttcttgcctggaaggacagacaattctataaaaaaccactggaacagt 558
Query: 421 tctgtgaagaagaaattggactcttacttggcatcaggtctattggaacagtttcaaggt 480
|||||||| ||||||||||| || ||||| |||||||| ||||| ||||||||||||||
Sbjct: 559 tctgtgaaaaagaaattggattcgtacttagcatcaggactattagaacagtttcaaggc 618
Query: 481 gttcctcttgttccgcatcaaaatcaaaccat-gccttcttctatggtgcaaagcagtgg 539
||||||||||||| |||| || || || | ||||||| | |||||||||||||||
Sbjct: 619 cttcctcttgttccacatc-aacccatgccttcatcttcttcaagggtgcaaagcagtgg 677
Query: 540 agatgatagtgctccaaaatgtggaacagaaacagaggaaatatcagaatgcagtcaaga 599
||||||||||| | |||||||||| ||| |||| |||||||||||||||||||||||
Sbjct: 678 agatgatagtggttttaaatgtggaatagatgcagaagaaatatcagaatgcagtcaaga 737
Query: 600 gtcaattctcgctggatgctcacaatctgcaggtggcttaggtaatgcagttttac---- 655
|||||| | ||||| ||||| || ||| |||||||||| |||||||||||||
Sbjct: 738 atcaattgtggctggctgctctcagtctatgagtggcttagggaatgcagttttaccatc 797
Query: 656 --gggaagaattccagctgaccgaagagtctggtcttggaaaggagcgaagctctagtcc 713
| |||||||| || || || ||||| ||||| || |||||||||||||||||||||
Sbjct: 798 aagagaagaatttcatctcactgaagaatctggcctcaaaaaggagcgaagctctagtcc 857
Query: 714 accatcttgttcagaacagtactttacatcagttggagatgtcactttttccatcccaga 773
| |||| ||||||||||| ||||| ||||| || |||||||||||||||||| | |||||
Sbjct: 858 agcatcctgttcagaacaatacttcacatcggtgggagatgtcactttttccgtaccaga 917
Query: 774 tataccttgtga 785
||||| |||||
Sbjct: 918 aataccctgtga 929
Score = 454 bits (229), Expect = e-126
Identities = 740/910 (81%), Gaps = 12/910 (1%)
Strand = Plus / Plus
Query: 944 cagagcacatgttaatatctgatgaggaatgttgccggttcttattttcggaggcaatga 1003
|||| |||||||| ||| ||||||| |||||||||| ||||||||| || ||||||||||
Sbjct: 1187 cagaccacatgtttataactgatgatgaatgttgccagttcttattctcagaggcaatga 1246
Query: 1004 atggtggcattttttcctctggaagttttacaaagggctcaaactcagttgcatgtatag 1063
|||| | ||||| |||||||| ||||| ||||| ||||||||| ||||| |||||
Sbjct: 1247 atggagcgatttt---ctctggaaattttatgaagggatcaaactcaattgcaaatatag 1303
Query: 1064 attccttgaattgtcaatcatcagacatccagatgtctcaaattgacagaacttcacaat 1123
|||||| | || ||| ||| | ||| |||||| || ||| ||| | | |||||||
Sbjct: 1304 attcctcaagttatcagtcaataaacaaccagatacctgaaactgaaaaagtttcacaac 1363
Query: 1124 caaatacttctttaaaatctggtgtattgcctacttcaagcagtcaatcatttccatctg 1183
|| || ||||| |||||||| | ||||| |||||| |||||| |||||| || |||
Sbjct: 1364 cagttaattcttcaaaatctgctctattggtgacttcatgcagtcgatcattgcccgctg 1423
Query: 1184 gtccttcgctactttcagctgatgatagtacactaatatgtggaagggaaccaaatcagt 1243
||| ||| ||||| ||||||||||||| | | ||| ||||| || | ||||||||||
Sbjct: 1424 gtcattctctactatcagctgatgatacttctataagatgtgatagagctccaaatcagt 1483
Query: 1244 ttatgggtcactcttttgcaggccatgaacaagagtttattacaagtcaacatgatggct 1303
| | || ||| | ||||||| ||||||||||||| ||||||||| | |||| || |
Sbjct: 1484 taactgggcacacatttgcagctcatgaacaagagtacattacaagtgcaaatgacggtt 1543
Query: 1304 tcgtatataccaatggcagtgatagtcacccctgtgataatggtacagataccacagaca 1363
| ||||||||||||||| || ||| ||||| |||| |||||||||| | |||| |||
Sbjct: 1544 ttatatataccaatggcactgttagctccccctatgatgatggtacagagaacacaaaca 1603
Query: 1364 tgcaagagcaacattatatgaaggaaccttcaaaattagtgtctgtgaatacttttgatt 1423
||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||| |
Sbjct: 1604 tgcaagagcaacattatctgaaggaaccttcaaaactagtgcctgtgaatactttcactg 1663
Query: 1424 caggttctaatactctgcagtcatgtcatgtgaatgaaatattaaatgagcaaagagaac 1483
| || | ||||| | |||| |||| |||| |||||||| |||| |||| ||||
Sbjct: 1664 ccagtaatgatactgggaagtcgtgtcctgtggatgaaata---aatgcacaaacggaac 1720
Query: 1484 agcaagatg---gagctctatgctatgaacctcctcgttttccaagtctggatattcctt 1540
|||| |||| ||||||| || ||||| ||||||||||| ||||| ||||||||||||
Sbjct: 1721 agcaggatgcaggagctctgtgttatgagcctcctcgtttcccaagcttggatattcctt 1780
Query: 1541 ttctgagctgtgatcttatacaatctggaagtgatatgcagcaagagtacagtcctcttg 1600
||||||||||||| |||||||| ||| | | |||||| ||||||||||| |||||||| |
Sbjct: 1781 ttctgagctgtgaacttatacagtctagtaatgatatacagcaagagtatagtcctctcg 1840
Query: 1601 gtattcgccaactgatgatgtcttccatgaattgcagtactccatttaggctatgggact 1660
|||| |||||||| |||||||| |||||||| |||| || ||||||||| |||||||||
Sbjct: 1841 gtatccgccaacttatgatgtcgtccatgaactgcatcacaccatttaggttatgggact 1900
Query: 1661 caccatctcgggatgatagtcctgatgctgtgctgaagagtgctgctaagactttcactg 1720
||||||||||||||||||||||| ||||||||||||| | || ||||||||||||||
Sbjct: 1901 caccatctcgggatgatagtcctaatgctgtgctgaaaacagccgctaagactttcac-- 1958
Query: 1721 gtacaccatccattttgaagaaacgaaatcgtgatttgttgtcacctttgtctgatagaa 1780
||||||||||||| | |||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 1959 -tacaccatccattctaaagaaacgaaatcgtgatctgttatcacctttgtctgatagaa 2017
Query: 1781 gaattgnnnnnnngcttgaggttgacatggcatctagtttgacaaaagagttttcaaggt 1840
| ||| ||||||| |||| ||| |||||||||||||||| ||||| || ||||
Sbjct: 2018 ggcttgacaaaaagcttgagattgatatgacatctagtttgacaaaggagttctcgaggt 2077
Query: 1841 tggatgttat 1850
||||||||||
Sbjct: 2078 tggatgttat 2087
Score = 400 bits (202), Expect = e-110
Identities = 804/1008 (79%), Gaps = 45/1008 (4%)
Strand = Plus / Plus
Query: 1930 gaagataaggaaaatgtagatcctgctttcgaaggtagacaagaaaaggggagagattgc 1989
|||||||| |||||| | ||||||||| | |||| | |||||||||| |||||||||||
Sbjct: 2152 gaagataaagaaaatatggatcctgctcttgaagttggacaagaaaaagggagagattgt 2211
Query: 1990 tctgcattcgaagacaatcaaatttctgagaagaattgtcatagcagtaattcccaggac 2049
||| ||||| ||| || | || |||||||| |||| ||||||| || ||||||||
Sbjct: 2212 tctacattcacagatcataagatgtctgagaaagattgcggtagcagtgatacccaggac 2271
Query: 2050 aacatggagcaatgtgctgttgatgctgatgctaaggacaaggttcatgcagatgctagt 2109
| || |||| | ||||||||| |||||||||| |||||||||| | |||||||||
Sbjct: 2272 agcacaaagcatgggactgttgatgatgatgctaagaccaaggttcatactgatgctagt 2331
Query: 2110 gcacaaattgtggaacagccttctgtaattcttcttgaagatagcataagtgatctgcta 2169
|||||||| ||||||| | | | | ||||||| ||||| | |||||||||
Sbjct: 2332 tcacaaatt---------ccttctggagtgcatgttgaagacagcatgaacgatctgcta 2382
Query: 2170 tt---ttctcctga---tggctttaaatcagataaagcatttgctcctagttctagaact 2223
|| ||||||||| ||| || |||||||||| |||||||| ||| |||||| |||||
Sbjct: 2383 ttcttttctcctgaagttggtttgaaatcagatagagcatttggtcccagttctcgaact 2442
Query: 2224 ccaaagaatttgtaccgtagaatattgggaacattatctgaacaatgcattgcttcggaa 2283
||||||||||| | |||||||||||||||||| ||||| || || |||||||||| |||
Sbjct: 2443 ccaaagaatttctgccgtagaatattgggaactttatcagagcatggcattgcttcagaa 2502
Query: 2284 tcttcttctggaaattcatgtatacttgtttgctcccctactattagcaaaaagaatcat 2343
||||| |||||||| || ||| | ||||| |||| ||||| |||||||| ||||||||
Sbjct: 2503 tcttcatctggaaactcttgttttgttgttagctctcctaccattagcaagaagaatcac 2562
Query: 2344 gaaagtcatttaattgcagcaactacatcagtacaatcacttccttcatcagcaccttca 2403
|||||||||||| ||||| | |||||||||||||| |||| | ||||||
Sbjct: 2563 gaaagtcatttagttgcatc---tacatcagtacaat---------catctgttccttca 2610
Query: 2404 gagtgtacatccaataacaatgcgaaagatgctgctactgaaaatcttagcatatttggc 2463
|| | || |||| || || ||||||| ||||||||||||||||||||||||
Sbjct: 2611 gaaaatgcagttgataatgctggaaatgatgctggtactgaaaatcttagcatatttggt 2670
Query: 2464 gaaactcctttcaaatggagtattgaatctccttcagcatggaaatctccttggttcata 2523
||||||||||| ||| |||||||||||||||||||||| ||||| || |||||||||||
Sbjct: 2671 gaaactccttttaaaaggagtattgaatctccttcagcgtggaagtccccttggttcatt 2730
Query: 2524 aattctttcctacctggcccaagagttgacacagacatatctattgaggatattgggtat 2583
|||||||| || ||||||||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 2731 aattcttttctgcctggcccaagggttgacacagacatttcaattgaggatattgggtat 2790
Query: 2584 tttatgagtcctggggatagaagctatgatgcccttggattgatgaggcagctaagtgag 2643
|||||||| ||||||||||||||||| ||||| ||| |||||||| |||| | ||||||
Sbjct: 2791 tttatgagccctggggatagaagctacgatgctattgcattgatgaagcagttgagtgag 2850
Query: 2644 cagactgcacctgcatatgctgatgctttagaggttctgggaaatgaaactcccgaaaca 2703
|| || || |||| | ||| || ||||| |||||| | ||||||||||| || ||||||
Sbjct: 2851 cacacagcctctgcttttgccgacgctttggaggttttaggaaatgaaacacctgaaaca 2910
Query: 2704 atattggaaaaaagacggtcc---------tataaagaccaagaaaacaatggtgcacaa 2754
||||| ||||| ||||| ||| ||| ||||||| || ||||||||
Sbjct: 2911 atattagaaaagagacgctccagcattcagaatatgaaccaagagaataatggtgccacc 2970
Query: 2755 aagaaccagcctgaaaatcattcgcatttggc---------tttgacggaatgccgtacc 2805
|| | ||||||| |||||||| |||||||| || ||| ||||||||||||
Sbjct: 2971 aatagtgagcctgagaatcattcccatttggcttcaaatatttcgacagaatgccgtacc 3030
Query: 2806 ctagacttcagtgaatgtgagacacctgggaagggaacagaaagagggaaatcttcatct 2865
|| |||||||||||||||| |||||||||||||||||||||||| |||||||||||| |
Sbjct: 3031 cttgacttcagtgaatgtgggacacctgggaagggaacagaaagggggaaatcttcaacc 3090
Query: 2866 gctatgagcttctctagcccctcttcctatctgctgaaaggctgcaga 2913
|| || | |||||| |||||||| ||||||||| |||| || ||||||
Sbjct: 3091 gccataatcttctcaagcccctcgtcctatctgttgaagggttgcaga 3138