Jatropha Genome Database

JcCA0297821.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0297821.20 - phase: 0 /partial
         (279 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30169.m006397 transcription factor, putative                          153   6e-37

>30169.m006397 transcription factor, putative
          Length = 1251

 Score =  153 bits (77), Expect = 6e-37
 Identities = 134/153 (87%)
 Strand = Plus / Plus

                                                                        
Query: 127  ccaaaggttcatgacttggaattcctggactgcatattagaggaaggtgaaatgctttac 186
            ||||| || ||||||||||||||  |||||||||| ||||||||||| ||||||||||||
Sbjct: 1096 ccaaaagtgcatgacttggaatttatggactgcattttagaggaaggggaaatgctttac 1155

                                                                        
Query: 187  atcccaccaaagtggtggcactatgtccgatctttaacaacaagtctctcggttagcttt 246
            ||||| ||||| ||||||||||||||||| ||| | || |||||| | || |||||||| 
Sbjct: 1156 atcccgccaaaatggtggcactatgtccgttctctgacgacaagtttatcagttagcttc 1215

                                             
Query: 247  tggtggagcgagtctggaagctctgatgtgtct 279
            |||||||||||||||||||| || | |||||||
Sbjct: 1216 tggtggagcgagtctggaagttcagctgtgtct 1248