Jatropha Genome Database
- JcCA0297521.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0297521.10 + phase: 0 /partial
(1028 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29827.m002661 9-cis-epoxycarotenoid dioxygenase, putative 367 e-101
>29827.m002661 9-cis-epoxycarotenoid dioxygenase, putative
Length = 1857
Score = 367 bits (185), Expect = e-101
Identities = 497/601 (82%)
Strand = Plus / Plus
Query: 425 tactttccgacaactttgctccggtcgatgagcttcctcctactgactgtgaggtgatag 484
|||||||||| ||||||||||| || ||||| || || || ||||| ||||||||| | |
Sbjct: 413 tactttccgataactttgctccagttgatgaactccccccaactgagtgtgaggtggtgg 472
Query: 485 aagggtctctcccatcatgcctcgacggtgcatacattcgcaacggtcccaatccacagt 544
| || || || | |||||||| || ||||| |||||||||||||| || || || ||||
Sbjct: 473 agggatcacttctgtcatgccttgatggtgcctacattcgcaacggaccaaacccgcagt 532
Query: 545 accttccgaaagggccttaccacctatttgatggagatggtatgcttcactctattagaa 604
|||| || ||||||||||||||||||||||||||| || ||||||||||| || ||||
Sbjct: 533 acctccctcgagggccttaccacctatttgatggagacggcatgcttcactccatcagaa 592
Query: 605 tctctcaaggcaaggccaaactctgcagccgctatgtcaagacttacaagtacatcaagg 664
|||||||||||||||||| ||||||||||||||||| ||||| || || |||| | ||
Sbjct: 593 tctctcaaggcaaggccactctctgcagccgctatgtgaagacctataaatacactatgg 652
Query: 665 agcgcgacgctggtgctcctcttcttccaaatgtgttttctgggttcaatgggctcgcag 724
|||| || ||||| || || |||||||| ||||| || ||||||||||| || || || |
Sbjct: 653 agcgtgatgctggagccccacttcttcctaatgtcttctctgggttcaacggccttgctg 712
Query: 725 cctctgcagcgcgcggtgctctttcagccgctagaattctttccggtcaatttaatcctg 784
|||| ||| | ||||||||||| ||||| ||| |||||||||| |||||||| ||||| |
Sbjct: 713 cctcggcaacacgcggtgctctctcagctgctcgaattctttctggtcaattcaatccgg 772
Query: 785 caaatggcattggtttagcaaacactagccttgctttctttggtaatagactgtacgcac 844
|||||||||||| |||||||||| ||||||||||||||||| ||| | || || ||||
Sbjct: 773 ttaatggcattggtctagcaaacaccagccttgctttctttggcaatcgtctttatgcac 832
Query: 845 taggtgaatctgacttgccttatgtcgtccgtttgactccgaatggggatatcgagactg 904
| ||||||||||| |||||||| || || ||||| ||||| || || ||||||
Sbjct: 833 ttggtgaatctgatctgccttatactgttcgattgacattaaatggagacattgagactc 892
Query: 905 ttggtcgccatgattttgacggcaagttattcttcagcatgactgcccatcccaagatag 964
| ||||||||||||||||| || ||||||||| | ||||||||||| || ||||||||||
Sbjct: 893 taggtcgccatgattttgaagggaagttattcatgagcatgactgctcaccccaagatag 952
Query: 965 accttgaaacaggcgagacctttgcatttcgatatgctcccataccgccatttttaacat 1024
||||||| ||||||||| | ||||| ||||| |||| ||| | || |||||| ||||||
Sbjct: 953 accttgagacaggcgaggcttttgcttttcggtatggtcctgtgcctccatttctaacat 1012
Query: 1025 a 1025
|
Sbjct: 1013 a 1013
Score = 52.0 bits (26), Expect = 7e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 161 caacttcatttccattacctcttcttaatgtctcatctgttagaattgaagaaaaacc 218
|||||| | ||||||| |||||| | | ||| |||||||||||||||||||| |||||
Sbjct: 122 caactttacttccattccctcttttcactgtatcatctgttagaattgaagataaacc 179