Jatropha Genome Database
- JcCA0297261.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0297261.20 + phase: 1 /pseudo/partial
(1979 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30147.m013899 Stachyose synthase precursor, putative 210 2e-53
29933.m001398 Stachyose synthase precursor, putative 88 2e-16
>30147.m013899 Stachyose synthase precursor, putative
Length = 2337
Score = 210 bits (106), Expect = 2e-53
Identities = 392/486 (80%), Gaps = 6/486 (1%)
Strand = Plus / Plus
Query: 1296 ttgcccgatggctccgttcttcgttgccaatctcatgctcttcctacgagagattgcctc 1355
||||| ||||| ||| | || |||||||||||| |||| |||||||| |||||||||||
Sbjct: 1657 ttgccggatggttccatcctacgttgccaatcttatgcacttcctactagagattgccta 1716
Query: 1356 tttgacgaccctttgcatgatggcaaaaccatgctcaagctctggaaccttaataaatat 1415
||||| |||||||| || ||||| ||||| ||||| ||| | |||||||| || | ||||
Sbjct: 1717 tttgatgaccctttacacgatggaaaaacaatgcttaagatttggaacctcaacagatat 1776
Query: 1416 ataggagttcttggactatttaattgtcaaggaggaggatggtgttgcataactaggagg 1475
| |||| | |||||||| |||||||||||||||||||||||||| || || | || ||
Sbjct: 1777 acaggaatgcttggactgtttaattgtcaaggaggaggatggtgctgtatttcaagaaga 1836
Query: 1476 aacatgggagcacccaagtttaaaaacaggatggattgtttggcaggtcctaaagatatt 1535
||| || | |||||||||| ||| ||| | || ||||||||| |||| |||||||||
Sbjct: 1837 cacaaaggtgaacccaagttttcaaataggttagactgtttggcaagtcccaaagatatt 1896
Query: 1536 gagtgggaaaatggaaag---aacccagttgccattaacaccgaaggagtgagccggttt 1592
|| ||| |||||||||| ||||||||| | | | | |||||| | | |||
Sbjct: 1897 gaatggaaaaatggaaatgtcaacccagttcc---tcagatacaaggagataccacattt 1953
Query: 1593 gctgtgtatttgttccaggaacagaagcttaagcttatgaagccaacagagaaattggag 1652
|| ||||| | |||| |||| ||||||| ||||| ||||||| |||||| | ||| |||
Sbjct: 1954 gccgtgtactcattcctggaagagaagctgaagctgatgaagctaacagaaagattagag 2013
Query: 1653 ttttcactagagccatttacttacgagctgcttatagtttctccagtgcaggccttgtca 1712
|| ||||| |||||||||||||| || || |||| ||||||||||||||| |||| ||
Sbjct: 2014 ttctcactcgagccatttacttatgaactacttacagtttctccagtgcacttcttgaca 2073
Query: 1713 aggaaattgatccaatttgctccaattggattagtgaacatgctcaattctggaggtgca 1772
||||||| || ||||||||||||||||||||||||| ||||| |||||||| ||||||
Sbjct: 2074 gggaaattaataaaatttgctccaattggattagtgaatatgctgaattctggtggtgca 2133
Query: 1773 attcag 1778
||||||
Sbjct: 2134 attcag 2139
Score = 105 bits (53), Expect = 1e-21
Identities = 116/137 (84%)
Strand = Plus / Plus
Query: 870 aattataaatttaggaactatgagagttctagggtaccctttagtaagggtatgggtgtc 929
|||||||||||||| ||||||||||| ||||||| |||| || ||||||||||||||
Sbjct: 871 aattataaatttagagactatgagagtcctagggtgccctctaataagggtatgggtgct 930
Query: 930 ttcagtaaagaccttaaaaaggaatttagggcattagattatgtatatgtttggcatgca 989
|| | || || || ||| ||||||||||| | | ||| ||||||||||||||||||||
Sbjct: 931 tttattagggatctcaaagaggaatttaggactgtggataatgtatatgtttggcatgca 990
Query: 990 ttgcttggttattgggg 1006
|||||||| ||||||||
Sbjct: 991 ttgcttggatattgggg 1007
Score = 97.6 bits (49), Expect = 2e-19
Identities = 134/161 (83%), Gaps = 1/161 (0%)
Strand = Plus / Plus
Query: 615 ccaagtattgtggacagatttgggtggtgcacttgggattctgtttaccg-ggggtggat 673
||||||||| |||||| |||||| ||||||||||||||| | |||||||| | ||| |||
Sbjct: 616 ccaagtattctggacaaatttggttggtgcacttgggatgcagtttaccgtgaggtcgat 675
Query: 674 cctaaatcagttaaagatggggtcagtggcctacaagagggtgggtgctctccaaattgg 733
|||||||| || | ||||||||| | || ||| ||| || |||||| ||||| | |||
Sbjct: 676 cctaaatctgtaagagatggggtgaagggactagcagaaggagggtgccctccacagtgg 735
Query: 734 gtccttattgatggtggttggcaatccatttgtcatgatga 774
|| |||||||||| |||||||||||| || || ||||||||
Sbjct: 736 gtacttattgatgatggttggcaatctatatgccatgatga 776
Score = 91.7 bits (46), Expect = 2e-17
Identities = 130/158 (82%)
Strand = Plus / Plus
Query: 1041 tttgctagagatggtatcagaggaatatggtgagtaagtggaagtcgctaaagcttatta 1100
||||||||||||| |||||||||| |||| | | ||||||| | || | |||||||||
Sbjct: 1227 tttgctagagatgatatcagaggataatggggggcgagtggaaattgccagagcttatta 1286
Query: 1101 caaggctcttagtgcttctataagaaaacattttaatggaaacggtgttattgctagtgt 1160
|||||| || |||| |||| | || | | |||| |||||||| |||||| ||||||| |
Sbjct: 1287 caaggcactgagtgattctgtgaggagatatttcaatggaaatggtgttgttgctagcat 1346
Query: 1161 ggaggaaggcaatgacttcgtgttccttggaacagagg 1198
|||| |||||||||||||| ||||||| ||||| ||||
Sbjct: 1347 ggagcaaggcaatgacttcatgttcctaggaaccgagg 1384
Score = 58.0 bits (29), Expect = 2e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 123 attctcaaacaagtccctaccaacattgttattacaccatc 163
||||||||||||||||||| |||||||||| ||||| ||||
Sbjct: 106 attctcaaacaagtccctaacaacattgttgttacatcatc 146
>29933.m001398 Stachyose synthase precursor, putative
Length = 2364
Score = 87.7 bits (44), Expect = 2e-16
Identities = 134/164 (81%)
Strand = Plus / Plus
Query: 1296 ttgcccgatggctccgttcttcgttgccaatctcatgctcttcctacgagagattgcctc 1355
|||||||| |||||| |||| || ||||| | ||||||||||||| ||||||||||||
Sbjct: 1681 ttgcccgacggctccattctccggtgccagtactatgctcttcctaccagagattgcctc 1740
Query: 1356 tttgacgaccctttgcatgatggcaaaaccatgctcaagctctggaaccttaataaatat 1415
||||| || || | || |||||||| || |||||||| | |||||||| || | | |
Sbjct: 1741 tttgaggatccccttcacgatggcaagacaatgctcaaaatttggaacctcaacaggttt 1800
Query: 1416 ataggagttcttggactatttaattgtcaaggaggaggatggtg 1459
| ||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 1801 actggagtcattggagtatttaattgtcaaggaggaggatggtg 1844
Score = 63.9 bits (32), Expect = 3e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 1725 caatttgctccaattggattagtgaacatgctcaattctggaggtgcaattcagtc 1780
||||||||||||||||| |||||||||||||||| |||||||||| || |||||
Sbjct: 2104 caatttgctccaattggtctagtgaacatgctcaacactggaggtgctatgcagtc 2159