Jatropha Genome Database

JcCA0297121.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0297121.10 - phase: 0 /partial
         (525 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28966.m000548 conserved hypothetical protein                          153   1e-36

>28966.m000548 conserved hypothetical protein
          Length = 1341

 Score =  153 bits (77), Expect = 1e-36
 Identities = 149/173 (86%)
 Strand = Plus / Plus

                                                                       
Query: 68  taccagatgagatcgctatggagtgtttagtaaaagttccatgccaatttcattctaata 127
           ||||||||||||| || ||||| ||| | ||||| || |||| ||| ||||||| |||||
Sbjct: 77  taccagatgagatagccatggaatgtctggtaaaggtaccataccagtttcattgtaata 136

                                                                       
Query: 128 tgaaatcagtctgccattcttggcaaaacttgatttcaaatccttctttttatcaactaa 187
           |||||||||| |||||  |||||||| ||||||||||  ||||||||||||| |||| ||
Sbjct: 137 tgaaatcagtttgccacacttggcaagacttgatttctgatccttctttttaccaacaaa 196

                                                                
Query: 188 ggcttaaatctggtaattcagagcaacttatttgccttgttcaacctcttcct 240
           ||| ||||||||| | |||||| || ||| |||||||||||||||||||||||
Sbjct: 197 ggcgtaaatctggcacttcagaacatcttgtttgccttgttcaacctcttcct 249