Jatropha Genome Database
- JcCA0296911.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0296911.20 - phase: 2 /partial
(1030 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28838.m000255 conserved hypothetical protein 454 e-127
>28838.m000255 conserved hypothetical protein
Length = 1527
Score = 454 bits (229), Expect = e-127
Identities = 643/781 (82%)
Strand = Plus / Plus
Query: 226 ggatttctctgtctccccttatatgtcatgggataaaagagcaagaaagaggcttctaag 285
|||||| || ||||||||||||| || |||| |||| ||| ||||||| ||| || |
Sbjct: 720 ggatttatcggtctccccttatacatcctgggggaaaacagctagaaagaagctcttacg 779
Query: 286 aagcatagaaagtgattttgaacttgtttatgtagctcaatcatgcttgtcatgggaagc 345
||||||||||||||| ||||||||||| |||||||| || |||||||||||||||||||
Sbjct: 780 aagcatagaaagtgactttgaacttgtctatgtagcccaggcatgcttgtcatgggaagc 839
Query: 346 cctacaccatcaatacagaaaagttgaagctcttgcaatcactacctctcaaaatgggat 405
||| | |||||||||||||| || ||||||||||| | |||| || |||||||| |
Sbjct: 840 cctgtatcatcaatacagaaaggtcgaagctcttgcttcctctacttcccaaaatggagt 899
Query: 406 attttctcatcatgtggctgaagaattgcagaagttcaaagtgcttttggagagatttat 465
||||| | || ||||||| | || || ||||||||| || | || ||||||||||||||
Sbjct: 900 attttatgataatgtggcaggtgatttccagaagttccaaatactcttggagagatttat 959
Query: 466 ggaagatgaaagatttgaaggcaaaagggtgtggaattatgttagaggaagattttcctt 525
||| |||||||| | |||||| ||| || | ||||||||||| ||||||||||||||
Sbjct: 960 ggaggatgaaaggtgtgaagggaaacggttatggaattatgtcagaggaagattttctca 1019
Query: 526 caagagccttcttcaagtccccaaggtttcaggattttttgagcaggcaaaggaggaaat 585
|| ||||||||| |||||||| |||||||||| ||||||||||||| || |||| | ||
Sbjct: 1020 caggagccttctccaagtccctcaggtttcagggttttttgagcaggaaatggagaacat 1079
Query: 586 gaaaatagaaggcataaatgttaaagaagtcctgaaagccatagagaggtgcatactagt 645
|||||| |||| | ||||| |||| ||||| |||| ||||||||||||||||| |
Sbjct: 1080 gaaaattgaagccttaaatattaaggaagtgttgaagtccatagagaggtgcatagaggc 1139
Query: 646 tttttgggtatttgtaaaaattgacaacaaaaagtcttggtggaaattcagaagttcctt 705
||| ||||||||||| | || || | |||||| | ||||||||| | ||||||| |||
Sbjct: 1140 tttctgggtatttgttagaacagatgagaaaaagccctggtggaaactgagaagtttctt 1199
Query: 706 atggacgtatccacctgtggaggaccctagagatttgaaattattagttgatctcactag 765
|||||| | |||||||||||||||||||||||| ||||| ||||| |||| |||||||
Sbjct: 1200 atggacttgtccacctgtggaggaccctagagacttgaagctattaactgatgtcactag 1259
Query: 766 aaatctccaaaagaaggaactatggttgaaagattcacaaggaaagcaaaggtgctggtt 825
| ||||| ||||||||||||||| |||||||||||||||| |||||||| ||||||||
Sbjct: 1260 gcaactccagaagaaggaactatggctgaaagattcacaagggaagcaaagatgctggtt 1319
Query: 826 caggaaagtggtaaaacccttggaagagtcccaaagaaaggatcttttgtttacaatgat 885
||||||||||||||| || | || ||||| |||||||||| | |||| || |||||
Sbjct: 1320 caggaaagtggtaaatcctgtagaggagtctcaaagaaaggtgatgatgttcacgatgat 1379
Query: 886 agacataaagttggtatcaagagttctacaactgtctgtaatctcctcgacccaactcaa 945
|||||| || ||||||||||||||||| ||| || | ||| | ||||| ||||| ||||
Sbjct: 1380 agacattaaattggtatcaagagttctccaattgccagtactttcctcttcccaaatcaa 1439
Query: 946 atggtgccaagaaaagctggacaatattgagttcaaagaagggaagattgttagggcttg 1005
|||||||||||||||||||| || || | ||| | ||||| |||||||| ||||||||
Sbjct: 1440 atggtgccaagaaaagctgggaaacatagggtttgaggaaggaaagattgtgagggcttg 1499
Query: 1006 c 1006
|
Sbjct: 1500 c 1500
Score = 77.8 bits (39), Expect = 1e-13
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 114 ctgaaagaatgagatggttcgatgtcctaaattacgagcgaacatgtggaataag 168
||||||||||||||||||||||||| || |||||||| ||||| |||||||||||
Sbjct: 629 ctgaaagaatgagatggttcgatgtgcttaattacgaccgaacctgtggaataag 683