Jatropha Genome Database

JcCA0296741.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0296741.10 + phase: 0 
         (369 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30078.m002287 Bud site selection protein, putative                    218   2e-56

>30078.m002287 Bud site selection protein, putative
          Length = 273

 Score =  218 bits (110), Expect = 2e-56
 Identities = 221/258 (85%)
 Strand = Plus / Plus

                                                                       
Query: 105 ggtgtatgaggagctgcaaaagcctgatgtggagaagaagtccttgcctctagacgagga 164
           ||||||||| |||||  |||||||||||   ||||| || || |||||||| || |||||
Sbjct: 3   ggtgtatgatgagctaaaaaagcctgattcagagaaaaaatcgttgcctcttgatgagga 62

                                                                       
Query: 165 cttgcctggcatgggccaatattattgcttgcactgcgaccgatactttgctaatgtgac 224
           ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 63  cttgcctggcatgggtcaatattattgtttgcactgcgaccgatattttgctaatgtgac 122

                                                                       
Query: 225 tgtgagggacgagcatttcaagaccaaacgccacagaaagcgtttgaagcaaatgatggg 284
           | | ||||| || ||||| ||  ||||||| ||||  |||||  |||||||||||  |||
Sbjct: 123 tataagggatgatcattttaaatccaaacgacacaagaagcgcgtgaagcaaatgtcggg 182

                                                                       
Query: 285 acctgcaccgcacactcaacttgatgctgacttagctggtgggatgggtatgccagataa 344
           |||||| || || || |||||||||||||| ||||||| ||| ||||||||||| |||||
Sbjct: 183 acctgcgccacatacacaacttgatgctgatttagctgctggcatgggtatgccggataa 242

                             
Query: 345 tggtcctaagcttatgtc 362
           ||| ||||||||||||||
Sbjct: 243 tggccctaagcttatgtc 260