Jatropha Genome Database
- JcCA0296711.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0296711.20 + phase: 0 /pseudo/partial
(941 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29681.m001313 WD-repeat protein, putative 878 0.0
>29681.m001313 WD-repeat protein, putative
Length = 1269
Score = 878 bits (443), Expect = 0.0
Identities = 755/859 (87%)
Strand = Plus / Plus
Query: 31 gaagtagctacagagaccacacaatcgattgaacaagactactcgtggcctttaattagg 90
||||||||| |||| || ||| |||| ||||||||||| ||||||||||| | || |||
Sbjct: 25 gaagtagctgcagaaactacagaatccgttgaacaagacaactcgtggcctgttatcagg 84
Query: 91 ttcgatttgcctccacggagaatccaccatttctacaagcagttcaggactagttcaaac 150
|||||||||||||||| ||||| ||||||||||| || |||||||||| ||| ||| |
Sbjct: 85 ttcgatttgcctccacagagaacacaccatttctataaacagttcaggagcagtccaatc 144
Query: 151 gctaacaatttcctcaaaggcgttaaatggtctccagatgggtcgtgttttttaacgagc 210
|||||||||| |||||||| ||||||||||||| ||||| |||||||| ||||||||
Sbjct: 145 cctaacaattttctcaaaggaattaaatggtctcctgatggttcgtgtttcttaacgagt 204
Query: 211 acggaggacaatacgctgcgtctattctcattaccagatgatggaagcggtagtgattct 270
| |||||||| || |||||| | ||||||||||||||| || | ||| || |||||||
Sbjct: 205 tctgaggacaagactctgcgtgtgttctcattaccagattattgtagcagtgatgattct 264
Query: 271 aatgcatgttctataaatgtcgatgaagattcctatgatgccagccttgttgtgaatgaa 330
| |||||||||| || || ||| |||||||||||||| | ||| |||| ||||| |||
Sbjct: 265 attgcatgttctttagatactgatcaagattcctatgattcgagcattgtcgtgaaggaa 324
Query: 331 ggggagtccgtttatgacttctgttggtacccatatatgactgcttcagaacctgttagt 390
||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 325 ggggaatctgtttatgacttctgttggtacccatatatgactgcttcagaccctgttagt 384
Query: 391 tgtgtattcgctagtactactcgtgaccatccaattcatctttgggatgctagttctggc 450
||||| || |||||||||||||| |||||||| ||||||||||||||||| |||||||||
Sbjct: 385 tgtgtgtttgctagtactactcgggaccatccgattcatctttgggatgcgagttctggc 444
Query: 451 ctgctgcgttgcacataccgtgcttatgatgctgtggatgaaattacggctgccttttca 510
||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 445 ctgttgcgttgcacataccgtgcttatgatgctgtggatgaaattactgctgccttttca 504
Query: 511 attgcatttaatcctgctgggaccaagatttttgctggatacaacaaatcagtaagagta 570
||| |||||||||||||||||| |||||| |||||||||||||||||||| |||| ||
Sbjct: 505 atttcatttaatcctgctgggaacaagatgtttgctggatacaacaaatctataagggtt 564
Query: 571 tttgatattcatcggcctggcagagattttgagcaatactcgaccctccaaggaaataaa 630
|||||||| ||||||||||| |||| |||||| || | || || || ||||||||||||
Sbjct: 565 tttgatatacatcggcctggtagagtttttgaacagcattcaacactgcaaggaaataaa 624
Query: 631 gaggggcaaacaggtataatatctgccattgctgtttctccaactcgtagtggaatgcta 690
||||||||||||||||||||||| ||||||| ||| |||||||| |||||||||| ||
Sbjct: 625 gaggggcaaacaggtataatatcctccattgccttttgtccaactcatagtggaatgtta 684
Query: 691 gctactggttcttatagccagactgcagcaatctttagggaggataacatggaactctta 750
|||||||||||||| ||||| ||| | |||||||||||||||||||| |||||||| ||
Sbjct: 685 gctactggttcttacagccatactactgcaatctttagggaggataatatggaacttttg 744
Query: 751 tatgttttacatggtcaagaaggtgggattacacatgtccaattctcaaaagatggaaac 810
|||||||| |||||||||||||||||||| |||||| |||||||||| | ||||||||||
Sbjct: 745 tatgttttgcatggtcaagaaggtgggataacacatatccaattctctagagatggaaac 804
Query: 811 tatctttatactggaggaaggaaggatccatatatcctgtgctgggatctgcgaaaaact 870
||||| ||||| |||||| |||||||||||||||| |||||||||||| |||||||||||
Sbjct: 805 tatctatataccggaggacggaaggatccatatatactgtgctgggatatgcgaaaaact 864
Query: 871 gttgaagttgtgtacaagt 889
| ||| |||||||||||||
Sbjct: 865 gctgaggttgtgtacaagt 883