Jatropha Genome Database
- JcCA0296561.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0296561.10 - phase: 2 /pseudo/partial
(1564 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29269.m000248 Receptor protein kinase CLAVATA1 precursor, putative 230 2e-59
>29269.m000248 Receptor protein kinase CLAVATA1 precursor, putative
Length = 2157
Score = 230 bits (116), Expect = 2e-59
Identities = 333/404 (82%), Gaps = 1/404 (0%)
Strand = Plus / Plus
Query: 1080 gctttgccgagaaattcaaagctccagaaagtgctaaaatttacacagtggcggagcttc 1139
||||||| |||||| |||||| || | ||||||||||||||| || || | || ||||
Sbjct: 1124 gctttgcaaagaaatacaaagcccctgcaagtgctaaaatttataccgttgtagaacttc 1183
Query: 1140 aatcagcaacaagcagtttcagtgaagagaatatactaggagagggatctcttggttgtg 1199
|||||||||||| ||||||||||||| ||||| || | ||||||||||||||||||| ||
Sbjct: 1184 aatcagcaacaaacagtttcagtgaaaagaatctaatcggagagggatctcttggttctg 1243
Query: 1200 tgtataaagctgaattccctgatggccaaatatcagctgtgaaatacatccgcatggcat 1259
| || | |||||| ||||||||||||||||||| ||||||| | ||||| | |||| ||
Sbjct: 1244 tttacagagctgagttccctgatggccaaatattggctgtgagaaacatcagtatggtat 1303
Query: 1260 cactatctttgcaagaagaagaacaattctcagatgtgctttgcaatgcatcgcgattga 1319
|||||||||| |||||||||||||||||| ||||| | || | |||||| ||| | |
Sbjct: 1304 cactatctttccaagaagaagaacaattcatggatgttatctggactgcatctcgactaa 1363
Query: 1320 ggcacccaaacattgtaacacttgttggctactgtatagaacatggacaacatcttcttg 1379
|||| |||||||||| |||||| |||| |||||| ||||||||||||| ||||| ||||
Sbjct: 1364 ggcatccaaacattgcgacacttcttggatactgtgtagaacatggacagcatctccttg 1423
Query: 1380 tgtatgagtatataaaaatgtta-cacttcatgatgttctgcataatgaagaacacaaat 1438
| || |||||||| |||| ||| | || || ||||||||||| ||||| | |||||
Sbjct: 1424 tttacgagtatatcaaaagtttatctctagataatgttctgcatggtgaaggatacaaac 1483
Query: 1439 cactgccatggattactcgcattaatattgcacttggtgttgct 1482
|||||||||||| ||| | |||||||||||||||||||||
Sbjct: 1484 cactgccatggacagttcgtctcaatattgcacttggtgttgct 1527
Score = 204 bits (103), Expect = 1e-51
Identities = 359/443 (81%), Gaps = 6/443 (1%)
Strand = Plus / Plus
Query: 343 catcaatttagcatgcaacaaattgaatcaaaatattccctattctttatctaccttgaa 402
|||||| ||||||| |||||| |||| |||||||| ||| |||| | || | ||| ||
Sbjct: 363 catcaacttagcattcaacaacttgagccaaaatataccccattcgctgtcaagcttaaa 422
Query: 403 agttctccgatatctgaatctaagccacaattcattatatgggcccattggcaatgtgtt 462
|||||| ||| || |||||||||||||||||| | | | |||||||||||||||||||||
Sbjct: 423 agttcttcgacatttgaatctaagccacaatttactgtctgggcccattggcaatgtgtt 482
Query: 463 cattgccatgaagaatctaaaagagatggatttatcattcaattacttcactggagattt 522
|| || | | ||||||||||||| ||||| |||||| |||| |||||| ||||| ||
Sbjct: 483 cactggcctaaagaatctaaaagcaatggacctatcatacaatgacttcagcggagactt 542
Query: 523 accaacttctataggatccctgacaaatctttctagattgttcttgcaaaataaccaatt 582
||| |||| | || || |||| ||||||| ||||||||||||||| || ||||||||
Sbjct: 543 gccaccttcatttggctctctgaaaaatcttagtagattgttcttgcagaacaaccaatt 602
Query: 583 caccggatcagttatctacctggctgatctaccgctaaccgatttgaacatccaaagcaa 642
||| ||||| ||||||||||| |||||||| || |||||||| ||||||||||| ||
Sbjct: 603 cactggatccgttatctaccttgctgatcttcccctaaccgacctgaacatccaatctaa 662
Query: 643 tcattttagtggtgttatcccagctcattttcagtcaatacaaaatctatggattgatgg 702
||| ||||| |||||||| || |||| ||||| | |||| |||||| |||||||||||
Sbjct: 663 tcaatttagcggtgttattcctactcaatttcaatacataccaaatctgtggattgatgg 722
Query: 703 gaacgaattc---atgggaggcaactacccaccctggaattttcctgaaacgaaaaatgt 759
||| | ||| || |||| |||||| ||||||||||||| |||| | |||||||
Sbjct: 723 gaataagttccatataggagccaactatccaccctggaattatcct---ctggaaaatgt 779
Query: 760 gaccgttgggaaaaattttagtg 782
|||| ||||| ||||||||||||
Sbjct: 780 gaccattgggcaaaattttagtg 802
Score = 123 bits (62), Expect = 3e-27
Identities = 139/162 (85%), Gaps = 2/162 (1%)
Strand = Plus / Plus
Query: 127 ccctgaataagccaccacagctgaaggggtggagaactggt-ggaggggatccatgtcag 185
||||||||||||| |||||||| ||| | |||| || ||| ||||||||||||||||||
Sbjct: 122 ccctgaataagcccccacagctcaagagttgga-aattggaaggaggggatccatgtcag 180
Query: 186 gagtcatggactggagttttttgttctggatcatctctcagagaccttaagcttcaggga 245
||||||||||||||||| | ||||||||||||||| | | ||||||| ||||||||
Sbjct: 181 gagtcatggactggagtatcatgttctggatcatctatagtacaccttaaaattcaggga 240
Query: 246 ttaaaccttagtgggtacctaggaacccaactgcataatctc 287
||||||||||||||||||| |||||||| || ||| |||||
Sbjct: 241 ctaaaccttagtgggtacctcggaacccagctccattatctc 282