Jatropha Genome Database

JcCA0295991.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0295991.10 - phase: 0 /partial
         (495 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28124.m000244 Chorismate mutase, chloroplast precursor, putative      387   e-107
30174.m009156 Chorismate mutase, chloroplast precursor, putative       58   5e-08

>28124.m000244 Chorismate mutase, chloroplast precursor, putative
          Length = 966

 Score =  387 bits (195), Expect = e-107
 Identities = 297/331 (89%)
 Strand = Plus / Plus

                                                                       
Query: 164 aagcatctgcctcttctattgggttggagaaaaagaaaagggtggatgagagtgaaaatt 223
           |||||||||| |||||||||||||||   || |||||| |||||||||||||||| ||| 
Sbjct: 158 aagcatctgcttcttctattgggttgacaaagaagaaacgggtggatgagagtgagaatc 217

                                                                       
Query: 224 tgaccctcgaacatataagacgttccttgattcgacaagaggatagcataatatttagcc 283
           ||||||| ||| ||||||||||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 218 tgacccttgaaaatataagacgttctttgattcggcaagaagatagcataatatttagcc 277

                                                                       
Query: 284 ttttagagaggtcccaatattgttacaatgctgatacctatgatcctgatgctttttcca 343
           |||| ||||| |||||||| ||||||||||||||||||||||| |||||||||||| |||
Sbjct: 278 ttttggagagatcccaatactgttacaatgctgatacctatgaccctgatgcttttgcca 337

                                                                       
Query: 344 tggatggcttccatggttcattggtagagtacatgctcagagaaattgaaaaacttcatg 403
           |||||||||| ||||| || |||||||||| |||||||||||||| |||||| |||||||
Sbjct: 338 tggatggctttcatggctctttggtagagttcatgctcagagaaactgaaaagcttcatg 397

                                                                       
Query: 404 ctcaggttggcagatacaagagccctgatgaacaccctttcttccctgatgacttgccgg 463
           ||||||| ||  ||||||||||||| ||||| | |||||||||||||||||||||||| |
Sbjct: 398 ctcaggtggggcgatacaagagcccggatgagctccctttcttccctgatgacttgccag 457

                                          
Query: 464 agccattgttgccacctctgcagtacccaca 494
           ||||||| ||||| |||||||| ||||||||
Sbjct: 458 agccattattgccgcctctgcaatacccaca 488


>30174.m009156 Chorismate mutase, chloroplast precursor, putative
          Length = 1077

 Score = 58.0 bits (29), Expect = 5e-08
 Identities = 128/161 (79%)
 Strand = Plus / Plus

                                                                       
Query: 253 attcgacaagaggatagcataatatttagccttttagagaggtcccaatattgttacaat 312
           ||||| |||||||||||||| |||   ||||||||   |||  | ||||||||||| |||
Sbjct: 361 attcggcaagaggatagcattatacgcagccttttgctgagagcacaatattgttataat 420

                                                                       
Query: 313 gctgatacctatgatcctgatgctttttccatggatggcttccatggttcattggtagag 372
           || || || ||||| |||||||| ||||||||||| || ||| |||| || ||||| || 
Sbjct: 421 gcagacacgtatgaccctgatgcgttttccatggaaggtttcaatgggtctttggttgaa 480

                                                    
Query: 373 tacatgctcagagaaattgaaaaacttcatgctcaggttgg 413
           |  ||  | ||||||| |||||| || ||||||| ||||||
Sbjct: 481 tttattgttagagaaactgaaaagctccatgctcgggttgg 521