Jatropha Genome Database

JcCA0294271.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0294271.10 + phase: 1 /pseudo/partial
         (690 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29908.m006063 Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl...   327   5e-89
29772.m000321 Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl...   192   2e-48
27940.m000333 Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl...    78   8e-14

>29908.m006063 Phospho-2-dehydro-3-deoxyheptonate aldolase 1,
           chloroplast precursor, putative
          Length = 1608

 Score =  327 bits (165), Expect = 5e-89
 Identities = 297/341 (87%)
 Strand = Plus / Plus

                                                                       
Query: 339 ttccctccgattgtgtttgccggtgaggctaggagcttggaggagaagcttgctgaggct 398
           |||||||||||||| || || ||||||||||| ||||| ||||| ||||| ||||| || 
Sbjct: 334 ttccctccgattgttttcgctggtgaggctagaagcttagaggaaaagctcgctgaagcc 393

                                                                       
Query: 399 gcaatgggaaatgcttttctattacaagggggagattgtgcagagagtttcaaggagttt 458
           |||||||| ||||||||| |||||||||| ||||||||||| |||||||| || ||||||
Sbjct: 394 gcaatgggcaatgcttttttattacaaggtggagattgtgccgagagttttaaagagttt 453

                                                                       
Query: 459 aacgccaataatatccgtgacactttcaggattctcctccagatgggtgctgttttgatg 518
           || || |||||||| ||||||||||| || || || ||||| |||||||| |||||||||
Sbjct: 454 aatgctaataatattcgtgacacttttagaatccttctccaaatgggtgccgttttgatg 513

                                                                       
Query: 519 tttggtggccaaatgcccgttatcaaggtgggaaggatggcgggtcagtttgcgaagcca 578
           || || ||||||||||| ||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 514 ttcggcggccaaatgcctgttgtaaaggtgggaaggatggcgggtcagtttgcgaagcca 573

                                                                       
Query: 579 agatcggagccttttgaggaaaagaatggagtgaagttgcctagttaccgaggggacaac 638
           ||||| || || ||||| |||||||||||||||||||| ||||| ||  |||||||||| 
Sbjct: 574 agatcagatccatttgaagaaaagaatggagtgaagttacctagctatagaggggacaat 633

                                                    
Query: 639 ataaatggagatgctgtcaatgagaagtcgagagttcctga 679
            ||||||| |||||| |  |||||||||||||| |||||||
Sbjct: 634 gtaaatggggatgcttttgatgagaagtcgagaattcctga 674


>29772.m000321 Phospho-2-dehydro-3-deoxyheptonate aldolase 1,
           chloroplast precursor, putative
          Length = 1602

 Score =  192 bits (97), Expect = 2e-48
 Identities = 265/321 (82%)
 Strand = Plus / Plus

                                                                       
Query: 333 gaggctttccctccgattgtgtttgccggtgaggctaggagcttggaggagaagcttgct 392
           |||||||| ||||| ||||| ||||| || || || || || || || ||||||||||||
Sbjct: 325 gaggcttttcctccaattgtctttgctggggaagcgagaagtttagaagagaagcttgct 384

                                                                       
Query: 393 gaggctgcaatgggaaatgcttttctattacaagggggagattgtgcagagagtttcaag 452
           || ||||| ||||| ||||||||| | || ||||| || |||||||| |||||||| |||
Sbjct: 385 gatgctgctatggggaatgcttttttgttgcaaggcggtgattgtgctgagagttttaag 444

                                                                       
Query: 453 gagtttaacgccaataatatccgtgacactttcaggattctcctccagatgggtgctgtt 512
           || ||||  || ||||||||  | ||||| || || ||||| || |||||||||| ||||
Sbjct: 445 gaatttagtgctaataatattagggacacctttagaattcttcttcagatgggtgttgtt 504

                                                                       
Query: 513 ttgatgtttggtggccaaatgcccgttatcaaggtgggaaggatggcgggtcagtttgcg 572
            | ||||||||||| |||||||| ||||| |||||||| || ||||| ||||| ||||| 
Sbjct: 505 cttatgtttggtggtcaaatgcctgttattaaggtggggagaatggcaggtcaatttgca 564

                                                                       
Query: 573 aagccaagatcggagccttttgaggaaaagaatggagtgaagttgcctagttaccgaggg 632
           ||||| ||||| || || |||||||| |||||||||||||||||||| || |||  ||||
Sbjct: 565 aagcctagatcagacccatttgaggagaagaatggagtgaagttgcccagctacaaaggg 624

                                
Query: 633 gacaacataaatggagatgct 653
           || || || ||||||||||||
Sbjct: 625 gataatattaatggagatgct 645


>27940.m000333 Phospho-2-dehydro-3-deoxyheptonate aldolase 1,
           chloroplast precursor, putative
          Length = 1557

 Score = 77.8 bits (39), Expect = 8e-14
 Identities = 126/155 (81%)
 Strand = Plus / Plus

                                                                       
Query: 405 ggaaatgcttttctattacaagggggagattgtgcagagagtttcaaggagtttaacgcc 464
           |||||||||||| || | ||||| || |||||||| ||||| || || |||||||| || 
Sbjct: 334 ggaaatgcttttttacttcaaggtggcgattgtgctgagagctttaaagagtttaatgct 393

                                                                       
Query: 465 aataatatccgtgacactttcaggattctcctccagatgggtgctgttttgatgtttggt 524
           ||||||||  | || ||||||||| || | ||||| ||||| | |||| | |  ||||||
Sbjct: 394 aataatattagagatactttcagggttttgctccaaatgggcgttgttctcacttttggt 453

                                              
Query: 525 ggccaaatgcccgttatcaaggtgggaaggatggc 559
           | |||||||||| | |||||||| |||||||||||
Sbjct: 454 gcccaaatgcccatcatcaaggtaggaaggatggc 488