Jatropha Genome Database

JcCA0294231.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0294231.10 + phase: 0 
         (774 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28153.m000288 PAC, putative                                           430   e-120
31177.m000029 hypothetical protein                                    100   2e-20

>28153.m000288 PAC, putative
          Length = 414

 Score =  430 bits (217), Expect = e-120
 Identities = 364/413 (88%)
 Strand = Plus / Plus

                                                                       
Query: 361 atggagattttgaaacgagaggctactcctgccatgagattgctgaacgatcttttgaat 420
           |||||||| || |||| ||||||||||||| | |||||| ||||||| ||||||||||||
Sbjct: 1   atggagatattaaaacaagaggctactccttctatgagactgctgaatgatcttttgaat 60

                                                                       
Query: 421 atgcatgatggttttgacgatgaaggatggctgaaagaatgcaaaaaatgcatgattgat 480
           ||||||||||| ||||| |||||||  |||||||| |||||||||||| |||||||||||
Sbjct: 61  atgcatgatggctttgatgatgaagattggctgaaggaatgcaaaaaacgcatgattgat 120

                                                                       
Query: 481 acctttccgcgtgaagatccattcagcattcttgttccggcagggtttgacattgataag 540
           || ||||| || || |||||||| || ||||||||||| ||||||||||| || ||||||
Sbjct: 121 acatttccacgggaggatccatttagtattcttgttccagcagggtttgatatcgataag 180

                                                                       
Query: 541 catcaagggccattgcaaccaccactagaagcagatgatgttcttttgagggtagatttt 600
           |||||||| ||| | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catcaaggaccactacgaccaccactagaagcagatgatgttcttttgagggtagatttt 240

                                                                       
Query: 601 gtaagggaggttgatgctttgctccaggaagttcggcatgagccaagtgaagaacagaat 660
           || || ||||| |||||||||||||||||||||||| |||||| || ||||| ||| |||
Sbjct: 241 gtcagagaggtagatgctttgctccaggaagttcgggatgagcaaaatgaagcacataat 300

                                                                       
Query: 661 atagaagggtttgatcctgaatctgttgcaagcaagctgaagcaacaagagaagcaacga 720
            | |||| ||| ||||||||||||||||||||||| ||||||||||||||||||||  ||
Sbjct: 301 gttgaagtgttcgatcctgaatctgttgcaagcaaactgaagcaacaagagaagcagaga 360

                                                                
Query: 721 acaattaggaaagtagaagctctgctagacctagctattaatttaaaatggta 773
           ||||| || |||||||| | |||||| || || || |||||||||||||||||
Sbjct: 361 acaataagaaaagtagaggatctgctggaactggcaattaatttaaaatggta 413


>31177.m000029 hypothetical protein
          Length = 395

 Score = 99.6 bits (50), Expect = 2e-20
 Identities = 71/78 (91%)
 Strand = Plus / Plus

                                                                       
Query: 117 gtatcgtgaaattggtttacggttgaagggatatccagaagaagatgttaagaaagcaag 176
           |||||| |||||||| || || ||||||||||||||||||||||||||||  ||||||||
Sbjct: 267 gtatcgggaaattggcttgcgtttgaagggatatccagaagaagatgttagaaaagcaag 326

                             
Query: 177 aaaattggtttcaagctt 194
           |||||||||||| |||||
Sbjct: 327 aaaattggtttcgagctt 344