Jatropha Genome Database
- JcCA0293541.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0293541.10 - phase: 0 /partial
(951 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30169.m006397 transcription factor, putative 385 e-106
>30169.m006397 transcription factor, putative
Length = 1251
Score = 385 bits (194), Expect = e-106
Identities = 437/518 (84%)
Strand = Plus / Plus
Query: 430 ttggttcgggaaacagagtttgataaggcggaggcgcttcgcttattaccgatgaagtcc 489
||||||| ||||| || |||||||||||||||| |||||| ||||||| |||||
Sbjct: 433 ttggttcaagaaacggaatttgataaggcggaggtgcttcgtgtattaccagcaaagtca 492
Query: 490 ttatcttgtaagattgtggtgaagagatctgccttatctttggaggcatttctacgtgaa 549
|| |||||||| | |||||| || | || || ||||| ||||||||||||||||||||
Sbjct: 493 ttgtcttgtaacaatgtggttaaaaaatgtggtttatcactggaggcatttctacgtgaa 552
Query: 550 catcttttatctagttctccagttataattagtgattgtatggctcattggcctgccagg 609
||| | |||| | ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 553 catatattatgtggttctccagttataattagtgattgcatggctcattggcctgccagg 612
Query: 610 ataaagtggaatgacgtggattacctgaaacgggttgctggtgaccgcactgttccagtt 669
| ||||||||||| ||| ||| | | | | ||||||||||| | |||||||| |||
Sbjct: 613 actaagtggaatgatttgggttatttaacaagagttgctggtgatagaactgttcctgtt 672
Query: 670 gaggttgggaaaacctatctatgccaagagtggaagcaagaactcataacattttcccag 729
|||||||| |||| |||| ||||| | || ||||||||||| || ||||| || |||||
Sbjct: 673 gaggttggaaaaaactatttatgcaatgattggaagcaagagcttataactttcgcccag 732
Query: 730 ttccttgagaggattcagcccaacaactctctttctgctgtccccacctatcttgctcag 789
|| ||||||| | ||||| | || ||||| ||||| ||||||||| ||||||||||||
Sbjct: 733 tttcttgagaagcttcagtcaaatgactcttcttctgatgtccccacttatcttgctcag 792
Query: 790 catccattgtttgatcagataaatgagctgaggaatgacatttgcgttcctgactactgt 849
|||||||||||||||||| ||||||| ||| ||||||||||||| ||||||| ||||||
Sbjct: 793 catccattgtttgatcaggtaaatgaactgcggaatgacatttgtattcctgattactgt 852
Query: 850 tttgctggaggtggggagcttagatcacttaatgcttggtttggtccagctgggacagtt 909
|||||||| |||||||||||||| || || ||||||||||| |||||||||| |||||
Sbjct: 853 tttgctggtggtggggagcttaggtccctcaatgcttggttcggtccagctgcaacagtg 912
Query: 910 acaccgttgcaccatgatccacaccataatatacttgc 947
||||| |||||||||||||| |||||||||||||||||
Sbjct: 913 acaccattgcaccatgatccgcaccataatatacttgc 950
Score = 206 bits (104), Expect = 2e-52
Identities = 263/316 (83%)
Strand = Plus / Plus
Query: 49 gacgccgaatcctctgttcttctccaatccatctcctcccacggcggttatgcttacgtc 108
|||||||||||| | ||| |||||||| |||||||| || ||||| || ||||| |||
Sbjct: 49 gacgccgaatccccgaatctcctccaatcaatctcctctcatggcggctacgcttatgtc 108
Query: 109 agtatggccactttggcggcctctggcgacttccgagctgctgaggccgcgcgtgagatg 168
|| ||||| ||| | || ||||| ||| |||||||||| |||||||| ||||||||||||
Sbjct: 109 agaatggcaactctagccgcctccggcaacttccgagcagctgaggcggcgcgtgagatg 168
Query: 169 gcttgggagcagctccattctggtccttggcattccgttcttcctgtctggcgtgacgct 228
|||||||||||||| |||| ||||| |||||||||||| || |||||||| |||||
Sbjct: 169 gcttgggagcagcttcattgcggtccctggcattccgtttcacccgtctggcgagacgca 228
Query: 229 tactcaatggcgtgtctctatgtagccaagttccattatcgaaacgctgagttcaaggat 288
|||||||||||||||||| | || || ||||||||||||| ||| | |||||| || |||
Sbjct: 229 tactcaatggcgtgtctccacgtggcaaagttccattatcaaaatggtgagtttaaagat 288
Query: 289 gcgcttagggttttggacatggggttgatcatgggtgggatgttgctgaggaaggatttg 348
|||||||||||||| || ||||| | |||||||| || ||||| | ||||| ||||||
Sbjct: 289 gcgcttagggttttagatatgggagtaatcatgggaggaatgttattaaggaaagatttg 348
Query: 349 gactcggctgttgaaa 364
|| || ||| ||||||
Sbjct: 349 gattcagctattgaaa 364