Jatropha Genome Database
- JcCA0293381.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0293381.10 + phase: 0
(264 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30027.m000837 r2r3-myb transcription factor, putative 168 1e-41
29933.m001439 r2r3-myb transcription factor, putative 100 8e-21
30147.m014041 r2r3-myb transcription factor, putative 70 7e-12
30005.m001298 Transcription repressor MYB4, putative 68 3e-11
29983.m003281 r2r3-myb transcription factor, putative 62 2e-09
30225.m001683 r2r3-myb transcription factor, putative 62 2e-09
30138.m004053 r2r3-myb transcription factor, putative 58 3e-08
28226.m000839 r2r3-myb transcription factor, putative 54 4e-07
30169.m006454 r2r3-myb transcription factor, putative 52 2e-06
30147.m013749 r2r3-myb transcription factor, putative 52 2e-06
28052.m000040 r2r3-myb transcription factor, putative 50 7e-06
29933.m001452 r2r3-myb transcription factor, putative 50 7e-06
>30027.m000837 r2r3-myb transcription factor, putative
Length = 267
Score = 168 bits (85), Expect = 1e-41
Identities = 187/221 (84%)
Strand = Plus / Plus
Query: 16 tgctgtgacaaaaatggattaaagaaaggtccatggacttctgaggaagatcagaagcta 75
||||| || ||||||||||||||||| |||||||||||| ||||||||||||||||| |
Sbjct: 16 tgctgcgataaaaatggattaaagaagggtccatggactgctgaggaagatcagaagttg 75
Query: 76 attgcttatattcagaaacatgggcatggcaggtggagaactctgccaaagaatgcaggg 135
|| | |||||||||||||||||| ||||| | ||| | | || ||||||||||||||
Sbjct: 76 atcgattatattcagaaacatggacatgggcgatggcggatcctcccaaagaatgcaggt 135
Query: 136 ttaaaacgatgtgggaagagctgcaggcttcgctggactaattacctgaggcctgacatt 195
||||| ||||||||||||| || | |||||||||||||||||| | || ||||| |||
Sbjct: 136 ctaaaaagatgtgggaagagttgtcgtcttcgctggactaattacttaagacctgatatt 195
Query: 196 aaacgagggaaattttctgttgaagaagaagatgccataat 236
||| |||| ||||||||| |||| |||||| | ||||||||
Sbjct: 196 aaaagaggaaaattttcttttgaggaagaacaggccataat 236
>29933.m001439 r2r3-myb transcription factor, putative
Length = 1029
Score = 99.6 bits (50), Expect = 8e-21
Identities = 131/158 (82%)
Strand = Plus / Plus
Query: 19 tgtgacaaaaatggattaaagaaaggtccatggacttctgaggaagatcagaagctaatt 78
|||||||| ||||| ||||||| || |||||||| |||| ||||||||||||||||||
Sbjct: 19 tgtgacaagaatgggctaaagaaggggccatggacacctgaagaagatcagaagctaatt 78
Query: 79 gcttatattcagaaacatgggcatggcaggtggagaactctgccaaagaatgcagggtta 138
| |||||| ||||||||||| |||||| |||||||| || ||||||||||| || |
Sbjct: 79 gattatatacagaaacatggttatggcaactggagaacacttccaaagaatgctggactg 138
Query: 139 aaacgatgtgggaagagctgcaggcttcgctggactaa 176
|| ||||||| ||||| ||| | ||||| ||||||||
Sbjct: 139 caaagatgtggaaagagttgccgtcttcgttggactaa 176
>30147.m014041 r2r3-myb transcription factor, putative
Length = 303
Score = 69.9 bits (35), Expect = 7e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 143 gatgtgggaagagctgcaggcttcgctggactaattacctgaggcct 189
||||||||||||| ||||||||| | |||||||||||||||||||||
Sbjct: 143 gatgtgggaagagttgcaggcttaggtggactaattacctgaggcct 189
>30005.m001298 Transcription repressor MYB4, putative
Length = 909
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 15 ttgctgtgacaaaaatggattaaagaaaggtccatggacttctgaggaagatca 68
||||||||| |||| ||||||||||||||||| |||||| |||||||||||||
Sbjct: 15 ttgctgtgagaaaatgggattaaagaaaggtccctggactcctgaggaagatca 68
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 145 tgtgggaagagctgcaggcttcgctggactaattacctgaggcctgacattaaacgagg 203
||||| ||||||||||| || | ||||| ||||||||||| |||||||||||||||||
Sbjct: 145 tgtggaaagagctgcagactgagatggacaaattacctgagacctgacattaaacgagg 203
>29983.m003281 r2r3-myb transcription factor, putative
Length = 1035
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 15 ttgctgtgacaaaaatggattaaagaaaggtccatggacttctgaggaagatcagaagct 74
|||||||||||||| |||| | ||||||||||| |||||| | || |||||||| || ||
Sbjct: 15 ttgctgtgacaaaactggactcaagaaaggtccttggactccagacgaagatcataaact 74
Query: 75 aattgcttatattca 89
||| ||||||||||
Sbjct: 75 catttcttatattca 89
>30225.m001683 r2r3-myb transcription factor, putative
Length = 657
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 15 ttgctgtgacaaaaatggattaaagaaaggtccatggacttctgaggaaga 65
||||||||| ||| |||||||||||||||| |||||||| ||||||||||
Sbjct: 15 ttgctgtgataaatctggattaaagaaaggtacatggactcctgaggaaga 65
>30138.m004053 r2r3-myb transcription factor, putative
Length = 870
Score = 58.0 bits (29), Expect = 3e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 31 ggattaaagaaaggtccatggacttctgaggaagatcagaagctaattgcttatattcag 90
||||||||||||||| ||||||| |||| || |||||||| || |||||||| |||||
Sbjct: 31 ggattaaagaaaggtgcatggacagctgatgaggatcagaaactcattgcttacattcaa 90
Query: 91 aaaca 95
|||||
Sbjct: 91 aaaca 95
>28226.m000839 r2r3-myb transcription factor, putative
Length = 843
Score = 54.0 bits (27), Expect = 4e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 143 gatgtgggaagagctgcaggcttcgctggactaattacctgaggcctgacattaa 197
||||||| ||||||||||||||||||||| |||||| |||| ||||| |||||
Sbjct: 143 gatgtggaaagagctgcaggcttcgctggttgaattacttgagacctgatattaa 197
>30169.m006454 r2r3-myb transcription factor, putative
Length = 918
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 143 gatgtgggaagagctgcaggcttcgctggactaattacctgaggcctgac 192
||||||| ||||| |||||||| ||||||| |||||| |||||||||||
Sbjct: 179 gatgtggaaagagttgcaggctccgctggatcaattacttgaggcctgac 228
>30147.m013749 r2r3-myb transcription factor, putative
Length = 834
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 142 cgatgtgggaagagctgcaggcttcgctggactaattacctgaggcctgacattaaacga 201
|||||||| |||||||| |||||||| ||||| || || || | |||||||||||||||
Sbjct: 73 cgatgtggaaagagctgtaggcttcggtggacaaactatcttcgccctgacattaaacga 132
Query: 202 gg 203
||
Sbjct: 133 gg 134
>28052.m000040 r2r3-myb transcription factor, putative
Length = 1077
Score = 50.1 bits (25), Expect = 7e-06
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 16 tgctgtgacaaaaatggattaaagaaaggtccatggacttctgaggaagatcagaagcta 75
|||||||||||| ||| || |||||||| |||||||| |||| ||||||||||| ||
Sbjct: 16 tgctgtgacaaagttggcttgaagaaaggaccatggacacctgaagaagatcagaaactc 75
Query: 76 attgcttatattcagaaacatgggcatgg 104
| ||||||||| | ||||||| |||||
Sbjct: 76 ttagcttatattgaagaacatggccatgg 104
>29933.m001452 r2r3-myb transcription factor, putative
Length = 273
Score = 50.1 bits (25), Expect = 7e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 148 gggaagagctgcaggcttcgctggactaattacctgaggcc 188
||||| || |||||||||||||||| ||||||||||||||
Sbjct: 154 gggaaaagttgcaggcttcgctggatgaattacctgaggcc 194