Jatropha Genome Database
- JcCA0292601.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0292601.20 + phase: 0 /partial
(1207 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29976.m000497 transcription factor, putative 708 0.0
29915.m000469 transcription factor, putative 268 7e-71
29917.m001969 transcription factor, putative 92 9e-18
>29976.m000497 transcription factor, putative
Length = 2586
Score = 708 bits (357), Expect = 0.0
Identities = 889/1065 (83%), Gaps = 11/1065 (1%)
Strand = Plus / Plus
Query: 124 gtttactgtgatacatatcacttggaggaatctggttggagggagtgttatataagtgaa 183
||||| |||||||||| || || ||||| | ||||||||||| ||||||| || |
Sbjct: 133 gtttattgtgatacattccatttagaggagcccggttggagggaatgttataattgtaac 192
Query: 184 aagcgcctccactgtggatgcatagcttctaagtctttgcttcaacttttggattttggg 243
||||| || ||||||||||||||||||||||||||| || || | |||||||||| ||||
Sbjct: 193 aagcgtcttcactgtggatgcatagcttctaagtctctgtttgagcttttggattatggg 252
Query: 244 ggtgttggttgtacgagctgtgcaaagaattatcgacttcacccgatccgtagtgatgag 303
||||| | ||||| |||||| ||| | || | ||||||| |||||| | ||||||||
Sbjct: 253 ggtgtggagtgtactggctgtgtaaaaagttcacaacttcactcgatccatggtgatgag 312
Query: 304 attcctaatggttttggcttgttaata---aataacgcctgtgatttggaatcaactcct 360
|||||||| || ||||||| || | | ||||| || ||||| || || | |||
Sbjct: 313 attcctaaaggatttggctcattgacacttaataatgctggtgatcctgactccatacct 372
Query: 361 ctagaaaatagagtggctggtcgtacttttgatgagggaaaacttgcacagctgtgcaga 420
||||||||| ||| || | || || | ||||| |||| |||||||||| ||||||||
Sbjct: 373 ctagaaaatcgagctactaatggtgctctggatgatggaagacttgcacagttgtgcaga 432
Query: 421 ctcatggaggctaatgcacccaacctattatgtcagtctgagggagctgacacaaatgca 480
||||||||||| |||| ||| | |||| ||||||||||||||||||||||||||||||
Sbjct: 433 ctcatggaggccaatgagccccaattattgtgtcagtctgagggagctgacacaaatgca 492
Query: 481 ggtctggggcaattcagacaagaggaggtgatgcatcaaattgtagaagctagctcaggg 540
||||| || |||||||||||||||||||| ||||||| ||||| |||||| || || |
Sbjct: 493 ggtcttggacaattcagacaagaggaggtcatgcatccaattggggaagctggcacaagt 552
Query: 541 ttctcagctgctgctcaatcatcagctggacaatctaaatttgcccaacc-------atc 593
|||||| ||| |||||||||||| | | |||||||||| ||||| |||
Sbjct: 553 ttctcaattgcatctcaatcatcagtagtgccatctaaattt-cccaatggtggtagatc 611
Query: 594 aatattagatatgagagatatccatggatcacatgctcagccatccttgagtatgtcaat 653
||||||||| ||||| ||||| || ||||| |||||||||||||| ||| |||| || |
Sbjct: 612 aatattagacatgagggatatgcacggatcgcatgctcagccatcactgaatatggcatt 671
Query: 654 gggagctccatcaggaacggcaagttttgctccatatccttgtggggttgttgaaggaaa 713
|||||||||||||||||| ||||||| || |||| ||||||||| |||||| ||||
Sbjct: 672 gggagctccatcaggaaccacaagtttcattcaatatgcttgtggggctgttgatggaag 731
Query: 714 agagcaaagcaaaacatctccctttcagcaagggcaaagatctcgtccaatattgccgaa 773
|||||| | || ||| |||| ||| |||||||||||||||||| ||||||||||| ||
Sbjct: 732 ggagcaaggaaagacacctccatttttgcaagggcaaagatctcgcccaatattgcccaa 791
Query: 774 accctcaaaaccggttcttgctgggagttcagagaccaataaggctgcagtctctgagct 833
||| |||||| | | || ||||||||||||| ||||||||| ||||||| |||||||
Sbjct: 792 accatcaaaaactggcttttctgggagttcagataccaataagactgcagttactgagct 851
Query: 834 gcgaattgcaagaccacctgctgagggacgggggaagaatcagttacttcccaggtactg 893
|||||||||||||||||| ||||||||||| || || |||||||| ||||| | |||||
Sbjct: 852 gcgaattgcaagaccacccgctgagggacgaggaaaaaatcagttgcttccacgctactg 911
Query: 894 gccaagaatcactgatcaagagctgcagcagttgtctggagatttgaattccaacattgt 953
||| ||||||||||| ||||||||||| || | ||||||||||| |||||||| |||||
Sbjct: 912 gccgagaatcactgaccaagagctgcaacaactatctggagatttaaattccaatattgt 971
Query: 954 cccattgtttgagaaggttctcagtgccagtgatgctggtcgaattggtcgcctagttct 1013
||||| |||||||| ||||| |||||||||||||||||||||||||| || |||||||
Sbjct: 972 gccattatttgagaaagttctaagtgccagtgatgctggtcgaattggccggttagttct 1031
Query: 1014 cccaaaagcatgtgctgaagcatattttcctcctatttctcaatctgaaggccttccttt 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1032 cccaaaagcatgtgctgaagcatattttcctcctatttctcaatctgaaggccttccctt 1091
Query: 1074 aaggattcaagatgtgaaggggagagaatggacatttcagttcagattttggcccaataa 1133
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1092 gaggattcaagatgtgaagggaagagaatggacatttcagttcagattttggcccaataa 1151
Query: 1134 taacagcaggatgtatgtcctggagggtgtaaccccttgcataca 1178
|| || || ||||||||| ||||||||||||||||||| |||||
Sbjct: 1152 caatagtagaatgtatgtcttggagggtgtaaccccttgtataca 1196
>29915.m000469 transcription factor, putative
Length = 2676
Score = 268 bits (135), Expect = 7e-71
Identities = 303/359 (84%)
Strand = Plus / Plus
Query: 847 ccacctgctgagggacgggggaagaatcagttacttcccaggtactggccaagaatcact 906
||||||||||| |||||||| |||||||| ||||| | || ||||| || || ||
Sbjct: 892 ccacctgctgaaggacggggacgaaatcagttgcttcctcgttattggcctaggataaca 951
Query: 907 gatcaagagctgcagcagttgtctggagatttgaattccaacattgtcccattgtttgag 966
|| |||||| | ||||| | |||| ||||| |||||||| ||||| || ||||| ||
Sbjct: 952 gaccaagagttacagcaaatatctgcagattcgaattccactattgtgccgttgttcgaa 1011
Query: 967 aaggttctcagtgccagtgatgctggtcgaattggtcgcctagttctcccaaaagcatgt 1026
||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 1012 aaggttctcagcgccagtgatgctggtcgcattggtcgtttagttctcccaaaagcatgt 1071
Query: 1027 gctgaagcatattttcctcctatttctcaatctgaaggccttcctttaaggattcaagat 1086
|||||||||||||| |||||||| |||||| | || || |||||| |||||||||| |||
Sbjct: 1072 gctgaagcatatttccctcctatctctcaaccggagggtcttcctctaaggattcaggat 1131
Query: 1087 gtgaaggggagagaatggacatttcagttcagattttggcccaataataacagcaggatg 1146
|| ||||||| ||| ||| ||||||||| |||||||||| |||||||||||||| |||
Sbjct: 1132 gtaaaggggaaagagtgggtgtttcagttccgattttggcctaataataacagcagaatg 1191
Query: 1147 tatgtcctggagggtgtaaccccttgcatacagtctatgcaattgcaagcgggtgatac 1205
||||| ||||||| |||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 1192 tatgttttggagggcgtaaccccttgcatacagtccatgcagttgcaagctggagatac 1250
>29917.m001969 transcription factor, putative
Length = 2565
Score = 91.7 bits (46), Expect = 9e-18
Identities = 180/222 (81%), Gaps = 2/222 (0%)
Strand = Plus / Plus
Query: 976 agtgccagtgatgctggtcgaattggtcgcctagttctcccaaaagcatgtgctgaagca 1035
||||| ||||||||||| |||||||| ||| |||| ||||||||| |||||| || ||
Sbjct: 988 agtgctagtgatgctgggcgaattgggcgcttagtgctcccaaaaaaatgtgcagaggct 1047
Query: 1036 tattttcctcctatttctcaatctgaaggccttcct-ttaaggattcaagatgtgaaggg 1094
|||||||| || || || || ||||||| | ||| |||||| | || |||| || ||
Sbjct: 1048 tattttccaccaatctcacatcctgaagggttacctcttaagg-tccaggatgctaaagg 1106
Query: 1095 gagagaatggacatttcagttcagattttggcccaataataacagcaggatgtatgtcct 1154
|||||||||| ||||||||| | || |||||||| ||||| ||||| |||||||||||
Sbjct: 1107 cagagaatggatatttcagtttcgtttctggcccaacaataatagcagaatgtatgtcct 1166
Query: 1155 ggagggtgtaaccccttgcatacagtctatgcaattgcaagc 1196
|||||| || || || ||||||||| ||||| |||||||||
Sbjct: 1167 ggagggggtgactccatgcatacagaatatgcgattgcaagc 1208