Jatropha Genome Database

JcCA0292331.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0292331.10 + phase: 0 
         (183 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29912.m005307 mitogen activated protein kinase kinase, mapkk2, p...   101   1e-21

>29912.m005307 mitogen activated protein kinase kinase, mapkk2,
           putative
          Length = 1023

 Score =  101 bits (51), Expect = 1e-21
 Identities = 117/139 (84%)
 Strand = Plus / Plus

                                                                       
Query: 16  ttaaaccctaatgtcaagctcaagctctctctccctcctcctgctgaggtttctctctct 75
           |||||||||| |||  |||| |||||| |||| |||||||||| ||| || ||  |  ||
Sbjct: 16  ttaaaccctattgtggagctgaagctcgctcttcctcctcctgatgaagtctcctttgct 75

                                                                       
Query: 76  aaattcctaactcaaagcggtacgtttatggatggcgatctgctcgtgaatcgcgatgga 135
           || ||| |||||||||||||||| |||||||| |||||||| || || ||||||||||| 
Sbjct: 76  aagttcttaactcaaagcggtacttttatggacggcgatctacttgttaatcgcgatggt 135

                              
Query: 136 gttcgaattgtctctcaaa 154
           |||||| ||||||||||||
Sbjct: 136 gttcgacttgtctctcaaa 154