Jatropha Genome Database
- JcCA0291681.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0291681.10 - phase: 0
(1188 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29137.m000022 conserved hypothetical protein 335 4e-91
>29137.m000022 conserved hypothetical protein
Length = 1197
Score = 335 bits (169), Expect = 4e-91
Identities = 424/509 (83%)
Strand = Plus / Plus
Query: 1 atgcccacgccggtcagcgttgcaagacaatgcttaacagacgaggcggcgcgtgctctt 60
|||||||||||||| ||||| ||||| ||||| ||||||||||| ||||||||||| ||
Sbjct: 1 atgcccacgccggtaagcgtagcaaggcaatgtttaacagacgaagcggcgcgtgcacta 60
Query: 61 gatgatgctgttgctgtggcgcgtcgtcgtagccatgctcaaactacatctctccatgct 120
| ||||| || | || |||||||| ||||| ||||| ||||| ||||| |||||||||
Sbjct: 61 caggatgcagtatcagtagcgcgtcgccgtagtcatgcacaaacgacatcgctccatgct 120
Query: 121 gtctctgctttacttgctttgccttcttctattctccgtgatgcttgtgcgcgcgctaga 180
||||| ||||||||||| || || ||||||| |||||||||||| ||||| || ||||||
Sbjct: 121 gtctccgctttacttgcgttaccctcttctactctccgtgatgcatgtgcacgtgctaga 180
Query: 181 aatagtccgtgttcttcccgccttcagtttcgcgcgcttgagctctgtgttggagtttct 240
|| |||||||||||||| |||||||||||||||||| | || | || || || |||||
Sbjct: 181 aagagtccgtgttcttcgcgccttcagtttcgcgcgttggaattatgcgtaggcgtttcg 240
Query: 241 cttgatcggttgtcttcgtcgaaaaccttggaggagcctcctatttcgaattctctcatg 300
|||||||| || | ||||| ||| || | || ||||| ||||| || ||||| || |||
Sbjct: 241 cttgatcgattaccgtcgtcaaaagccctagatgagccacctatatctaattcacttatg 300
Query: 301 gcggcgattaaacggtctcaggcgaatcagcggagacatcctgataactttcacttgcag 360
|||||||||||| | || ||||| ||||| || |||| |||||||| ||||||||||||
Sbjct: 301 gcggcgattaaaagatcgcaggctaatcaaaggcgacaccctgataattttcacttgcag 360
Query: 361 caaatacactgtaatcaacaaccgccgtcggttttgaaggttgagcttaagtacttcatt 420
||||| || || |||||||| || || || |||||||| |||||| | ||| | || |||
Sbjct: 361 caaattcattgcaatcaacagccaccttccgttttgaaagttgagttgaagcattttatt 420
Query: 421 ttgtccattttggatgatccgattgtcagtcgggtactcggtgaggctgggtttaggagt 480
|| |||||||||||||| |||||||| ||||| || | ||||| ||||||||||| |||
Sbjct: 421 ttatccattttggatgacccgattgtgagtcgagttttaggtgaagctgggtttagaagt 480
Query: 481 tgtgatattaagttggccattattcaccc 509
|||||||||||||| || |||||||||||
Sbjct: 481 tgtgatattaagttagctattattcaccc 509
Score = 155 bits (78), Expect = 7e-37
Identities = 141/162 (87%)
Strand = Plus / Plus
Query: 1027 tttagagataagttgtggttgatgggagctgcagctaaacatgaaacttattccaagttg 1086
|||||| | |||||||||||||||||||||||||| | | ||||||| ||||| |||||
Sbjct: 1036 tttagaaacaagttgtggttgatgggagctgcagccacatatgaaacgtattctaagttt 1095
Query: 1087 ttggggcaatttccagctatagaaaaggattgggatcttcatattctaccaatcacttct 1146
|| || |||||||| |||||||||||||||||||||||||| |||| || || ||||||
Sbjct: 1096 ttaggcaaatttccatctatagaaaaggattgggatcttcatcttctgcccattacttct 1155
Query: 1147 tctaaaagtccttttgattgttttggctccaaatctaggtga 1188
|||||||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 1156 tctaaaagtcctattgatacttttggctctaaatccaggtga 1197
Score = 83.8 bits (42), Expect = 2e-15
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 696 cttgttgcttcttggtgtctgtgctggtgatgctttgaatagatttatcgaatgtgtaaa 755
|||||||||||||||||| |||||| |||||||||||| ||| ||||| |||||||||||
Sbjct: 687 cttgttgcttcttggtgtttgtgctagtgatgctttgagtaggtttattgaatgtgtaaa 746
Query: 756 ta 757
||
Sbjct: 747 ta 748