Jatropha Genome Database
- JcCA0290181.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0290181.10 - phase: 2 /partial
(1792 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29692.m000540 DELLA protein GAIP-B, putative 904 0.0
28677.m000055 DELLA protein GAI, putative 107 2e-22
29957.m001404 hypothetical protein 54 3e-06
30131.m007029 DELLA protein GAI1, putative 54 3e-06
>29692.m000540 DELLA protein GAIP-B, putative
Length = 1830
Score = 904 bits (456), Expect = 0.0
Identities = 945/1108 (85%)
Strand = Plus / Plus
Query: 654 caactcgtccagtggtcctagtggactcgcaagaaaacggaatccgactcgttcatcttc 713
||||||| || || |||||||| |||||||||||||| ||||||||||||||||| || |
Sbjct: 671 caactcgacccgtagtcctagttgactcgcaagaaaatggaatccgactcgttcacctcc 730
Query: 714 taatggcttgtgcagaagctgttcaagataataacctaactctagccgaagctttagtaa 773
||||||| |||||||||||||||||| | || |||||||| ||||| || || | || |
Sbjct: 731 taatggcatgtgcagaagctgttcaacaaaacaacctaaccctagcagaggcccttgtca 790
Query: 774 agcaaatcggtttcttggctgcttctcaagccggagcgatgcgtaaggtggccacctact 833
||||||||||||||||||| | |||||||||||||| |||||||| || || || ||||
Sbjct: 791 agcaaatcggtttcttggcggtctctcaagccggagctatgcgtaaagtcgctacttact 850
Query: 834 tcgccgaggccttggctcgaagaatctatagactctacccaccaagtccagtagaccatt 893
| || || || || ||||||||||| |||||||| || || | |||||| | || ||||
Sbjct: 851 ttgcagaagcgttagctcgaagaatttatagactttatccccagagtccaatcgatcatt 910
Query: 894 ccttatccgatattcttcagatgcacttctacgaaacttgcccatatctcaaattcgctc 953
| | ||||||||||||||||||||||| || || || ||||| ||||| ||||||||||
Sbjct: 911 ctctctccgatattcttcagatgcacttttatgagacctgcccttatcttaaattcgctc 970
Query: 954 atttcactgcaaatcaagcaatccttgaagcttttgaagggaaaaagcgagtccatgtca 1013
|||||||||| ||||| ||||| || |||||||||||||| |||||| |||||||||| |
Sbjct: 971 atttcactgctaatcaggcaattctcgaagcttttgaaggtaaaaagagagtccatgtta 1030
Query: 1014 tcgatttctccatgaatgaaggtatgcaatggcctgctttattacaagctcttgctctta 1073
| || || || |||||| |||||||||| |||||||||||||| |||||| | ||||| |
Sbjct: 1031 ttgacttttctatgaatcaaggtatgcagtggcctgctttattgcaagctttagctctca 1090
Query: 1074 gacctggtggcccgccagctttccggttaaccggaattggacctccttcgcatgatgatt 1133
|||||||||| ||||| |||||||| |||||||||||||| || ||||| |||||| | |
Sbjct: 1091 gacctggtggtccgcctgctttccgattaaccggaattgggccgccttcccatgataact 1150
Query: 1134 ccgatcaccttcaagaagtagggtggaaattggctcagttagcggagacgattcatgttg 1193
| || || ||||||||||| || |||||||||||||||||||| ||||| || |||||||
Sbjct: 1151 cggaccatcttcaagaagtgggttggaaattggctcagttagcagagactatacatgttg 1210
Query: 1194 agtttgaatatagaggattcgtagctaatagtttagcagatctcgacgcgtctatgcttg 1253
||||||| |||||||| || || |||||||||||||| ||||| || || || |||||||
Sbjct: 1211 agtttgagtatagagggtttgttgctaatagtttagctgatcttgatgcttccatgcttg 1270
Query: 1254 aacttaggcccaatgagtttgagtctctcgcggttaactcagtcttcgagttacataaat 1313
|||| || | || |||||| || || | || ||||||||||| |||||||| |||||||
Sbjct: 1271 aactcagacacactgagttcgaatcggttgctgttaactcagttttcgagttgcataaat 1330
Query: 1314 tgttagccagaccaggcgccattgagaaagttctttcagtagtgaaacagatgaaaccgg 1373
| ||||| ||||| || || ||||| || ||||||||||| || || || ||||||||||
Sbjct: 1331 tattagctagacctggtgctattgacaaggttctttcagtggttaagcaaatgaaaccgg 1390
Query: 1374 agattgttactattgttgaacaagaagcgaaccataatggtccggttttcttagaccgat 1433
| ||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||| |
Sbjct: 1391 aaattgttactatcgttgagcaagaagcgaaccataatggaccggttttcttggaccggt 1450
Query: 1434 ttactgagtcattgcattattactcgactctgtttgactcgttagaaggatcggcgagta 1493
| || |||||||||||||||||||| |||||||| |||||||| |||||||| | |||||
Sbjct: 1451 tcaccgagtcattgcattattactcaactctgttcgactcgttggaaggatcagtgagta 1510
Query: 1494 ctcaagataaggtgatgtctgaggtgtacttaggtaaacaaatttgcaatgttgtggcat 1553
||||||||||||| ||||| || ||||| |||||||| || ||||| |||||||||||||
Sbjct: 1511 ctcaagataaggttatgtcagaagtgtatttaggtaagcagatttgtaatgttgtggcat 1570
Query: 1554 gtgaaggggcagaccgagttgagagacacgagacattaactcagtggcgaactcggttgg 1613
||||||| || ||| | || || ||||| |||||||||||||||||||||||||||||||
Sbjct: 1571 gtgaaggagcggacagggtggaaagacatgagacattaactcagtggcgaactcggttgg 1630
Query: 1614 gctcatcagggtttgtgccggttcatctcgggtccaatgcgtttaagcaagcaagcatgt 1673
| | | ||||||| ||||||||||| || || |||||||||||||||||||||||||
Sbjct: 1631 gattggctgggtttgctccggttcatcttggatcaaatgcgtttaagcaagcaagcatgt 1690
Query: 1674 tactggccttatttgccggcggagatgggtatagagtggaagagaataatgggtgtttga 1733
| | || ||||||||||| || ||||| ||||||||||| |||||||||||||||||||
Sbjct: 1691 tgttagctttatttgccggaggggatggatatagagtggatgagaataatgggtgtttga 1750
Query: 1734 cgctgggttggcatactcggccactcat 1761
| |||| |||||||||||||| |||||
Sbjct: 1751 tgttggggtggcatactcggccgctcat 1778
Score = 208 bits (105), Expect = 9e-53
Identities = 221/259 (85%), Gaps = 3/259 (1%)
Strand = Plus / Plus
Query: 42 gcaagatatgggaagacgaagcac---aaggtgatggtggaatggatgagcttttagctg 98
||||||| ||||||||||||| | |||| ||||| || ||||||||||| | ||||
Sbjct: 125 gcaagatttgggaagacgaagaagctaaaggagatggcggtatggatgagctactggctg 184
Query: 99 ttttgggttataaggtaaggtcatccgacatggcagaagtagctcaaaagcttgaacaac 158
|||||||||| || || |||||||| || ||||||||||| |||||||| ||||||||||
Sbjct: 185 ttttgggttacaaagttaggtcatcggatatggcagaagtggctcaaaaacttgaacaac 244
Query: 159 ttgaagaagttatgtgtaatgtacaggaagatggactttctcatctttcttctgaaactg 218
|||||||||||||| ||||||| || ||||||||||||| ||| ||| | |||||||| |
Sbjct: 245 ttgaagaagttatgggtaatgttcaagaagatggactttgtcagcttgcatctgaaaccg 304
Query: 219 ttcattataatccttctgatatatctacatggcttgaaagtatgttatctgagcttaatc 278
|||||||||||||||||||| ||||||| ||| | ||||||||| | ||||| ||||| |
Sbjct: 305 ttcattataatccttctgatctatctacttggttggaaagtatgctttctgaacttaacc 364
Query: 279 ctaatcctaatttcgatcc 297
| ||||| ||||| |||||
Sbjct: 365 caaatcccaattttgatcc 383
>28677.m000055 DELLA protein GAI, putative
Length = 1704
Score = 107 bits (54), Expect = 2e-22
Identities = 120/142 (84%)
Strand = Plus / Plus
Query: 1637 catctcgggtccaatgcgtttaagcaagcaagcatgttactggccttatttgccggcgga 1696
|||||||| || ||||||||||| ||||| || |||||| | |||||||||||||| ||
Sbjct: 1543 catctcggttcgaatgcgtttaaacaagctagtatgttattagccttatttgccggtggc 1602
Query: 1697 gatgggtatagagtggaagagaataatgggtgtttgacgctgggttggcatactcggcca 1756
|||||||||||||| || || ||||| |||||||| | ||| |||||||||||| | |||
Sbjct: 1603 gatgggtatagagtagaggaaaataacgggtgtttaatgcttggttggcatactagacca 1662
Query: 1757 ctcattgcaacatcggcatggc 1778
|| ||||| || ||||| ||||
Sbjct: 1663 ctgattgctacctcggcttggc 1684
Score = 83.8 bits (42), Expect = 3e-15
Identities = 96/114 (84%)
Strand = Plus / Plus
Query: 95 gctgttttgggttataaggtaaggtcatccgacatggcagaagtagctcaaaagcttgaa 154
||||||||||||||||| || || ||||| || |||||||| || |||||||||||||||
Sbjct: 130 gctgttttgggttataaagttagatcatctgatatggcagaggttgctcaaaagcttgaa 189
Query: 155 caacttgaagaagttatgtgtaatgtacaggaagatggactttctcatctttct 208
|| |||||| |||||| ||| || || |||||||| ||||||||||||||
Sbjct: 190 cagcttgaaatggttatgggtattgctcaagaagatggtatttctcatctttct 243
Score = 83.8 bits (42), Expect = 3e-15
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 912 agatgcacttctacgaaacttgcccatatctcaaattcgctcatttcactgcaaatcaag 971
||||||| ||||| || |||||||| |||||||||||||| ||||||||||| || ||||
Sbjct: 809 agatgcatttctatgagacttgcccttatctcaaattcgcacatttcactgcgaaccaag 868
Query: 972 caatccttgaagcttttg 989
| || |||||||||||||
Sbjct: 869 ccattcttgaagcttttg 886
>29957.m001404 hypothetical protein
Length = 267
Score = 54.0 bits (27), Expect = 3e-06
Identities = 70/83 (84%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 1025 atgaatgaaggtatgcaatggcctgctttattacaagctct-tgctcttagacctggtgg 1083
|||||| | |||||||| |||||||||||||| |||||| | ||||| ||||| |||||
Sbjct: 94 atgaatcatggtatgcagtggcctgctttattgcaagctttcagctctcagaccaggtgg 153
Query: 1084 cccgccagctttccggttaaccg 1106
| ||| |||||||| |||||||
Sbjct: 154 tctgcccgctttccgattaaccg 176
>30131.m007029 DELLA protein GAI1, putative
Length = 2061
Score = 54.0 bits (27), Expect = 3e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 930 cttgcccatatctcaaattcgctcatttcactgcaaatcaagc 972
||||||| ||| | |||||||||||||||||||| ||||||||
Sbjct: 1226 cttgcccgtatataaaattcgctcatttcactgctaatcaagc 1268