Jatropha Genome Database
- JcCA0289691.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0289691.10 - phase: 0 /pseudo/partial
(1389 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29851.m002400 DNA mismatch repair protein muts2, putative 617 e-176
>29851.m002400 DNA mismatch repair protein muts2, putative
Length = 2622
Score = 617 bits (311), Expect = e-176
Identities = 539/615 (87%)
Strand = Plus / Plus
Query: 1 ctggaggaaaaactgcttctatgaaaactctaggcatagcatctcttatgtcaaaggctg 60
||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 1208 ctggagggaaaactgcttctatgaaaacactgggcatagcatctcttatgtcaaaggctg 1267
Query: 61 gcttgtttttgcctagtaaaaacatcccaagaattccatggtttgatcttgttctagcgg 120
|||| ||||||||| || ||||| ||||| ||||||||||||||| |||||||||| |
Sbjct: 1268 gcttatttttgcctgctagaaacaccccaaagattccatggtttgatgttgttctagcag 1327
Query: 121 atattggagatcaccagtcgctggagcaaaatctttcaacttttagtgggcacatatcac 180
||||||| ||| ||||||| ||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 1328 atattggggataaccagtctctggaacaaaatctctcaacttttagcgggcacatatcac 1387
Query: 181 gcctttgtaagatcttggaagtggcctctaaagaatcacttgtcctcatagacgaaattt 240
|| |||||||||||||||||||| |||| |||||||| || || ||||| ||||||||||
Sbjct: 1388 gcatttgtaagatcttggaagtgacctcaaaagaatccctcgttctcattgacgaaattt 1447
Query: 241 gtagcggaacagatccttctgaaggggtggcactttcagccagcatcttaaaatatctta 300
| || ||||| ||||||||||| || || ||||||||| ||||||| ||| ||||||||
Sbjct: 1448 gcagtggaactgatccttctgagggtgtagcactttcaaccagcatattacaatatcttc 1507
Query: 301 aagatcgtgttaacttagctgttgtaacaactcattatgctgatttaagtcgcctcaaag 360
|||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||
Sbjct: 1508 gagatcgtgttaacttagctgttgttacaactcattatgctgatttaagtctcctgaaag 1567
Query: 361 ataaggatactggatttgtgaatgcggccatggaattttctcttgaaaccttacaaccta 420
||| |||| | ||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1568 atagcgatagtcaatttgagaatgcagccatggaattttctcttgaaaccttacaaccta 1627
Query: 421 cttatcagatcctctgggggagaactggtgattctaatgcactaagcattgctgaatcta 480
| |||||||||||||||||||| ||||| | ||||||||| ||||||| ||| |||| |
Sbjct: 1628 cctatcagatcctctgggggagtactggcaactctaatgcattaagcatagctaaatcaa 1687
Query: 481 ttggttttgatagtagtattattgaacgtgcacagatgtgggttgagaagttaatgcctg 540
||||||||||||||| || |||||||||||| | | |||||| ||||| ||||| || |
Sbjct: 1688 ttggttttgatagtaacataattgaacgtgcagaaaagtgggtagagaaattaattccag 1747
Query: 541 aaaagctgcaacagcggaaaggtttgctgtatcaatcactactggaggaaagaaacagat 600
|||||| ||| || || ||||| ||||| ||| |||||||| |||| |||||||||| ||
Sbjct: 1748 aaaagcagcagcaccgaaaaggcttgctatataaatcactaatggatgaaagaaacaaat 1807
Query: 601 tggaaactcaggcca 615
||||| |||||||||
Sbjct: 1808 tggaagctcaggcca 1822
Score = 523 bits (264), Expect = e-148
Identities = 604/716 (84%), Gaps = 6/716 (0%)
Strand = Plus / Plus
Query: 673 gcactcatggcaaaagaaacccaacaggtccaacaggaagtaaaggttacgaagtctcag 732
||||| ||||||||||||||||| ||||| || |||||| |||||| || |||||||||
Sbjct: 1909 gcactgatggcaaaagaaacccagcaggtgcagcaggaactaaaggccacaaagtctcag 1968
Query: 733 atagaaattgtggtgcataactttgaaaatcagcttagaaaagcgagcccagatcagttt 792
||||||| |||||| || |||||||| |||| || |||||||| || ||| |||||||
Sbjct: 1969 atagaaactgtggttcacaactttgagaatctactcagaaaagccagtccacttcagttt 2028
Query: 793 aattcactgattagaaagtcagaatctgcaattgcatccattgttgaagctcattgtcct 852
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2029 aattctctgatcagaaagtcagaatctgcaattgcatccattgttgaagctcattatcct 2088
Query: 853 gctgaaagtcttcctgccaatgaagcagatagtagttcatatacaccacaacttggagag 912
||||| | ||| ||||||| ||| |||| |||||||||||| |||||| | ||||||
Sbjct: 2089 gctgacaatctccctgccagtga---agatgttagttcatataccccacaattaggagag 2145
Query: 913 gaagtccatgtgaagggactaggagataaagtagttactgtagttgaagcactgggaaat 972
|||| || ||||||| | ||| |||| || | |||||||||||||||| |||||
Sbjct: 2146 caagttcacttgaaggggttcggaaataaggtggcaactgtagttgaagcaccaggaaaa 2205
Query: 973 gatgagacaatcttagtccaatatggtaaaataagagtttgtgtgaagaaaagtgatatt 1032
|||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||
Sbjct: 2206 gatgagacaatcttagtccaatatggtaaaattagagttcgtgtgaagaaaagtgacatt 2265
Query: 1033 agatccattcaagctaacaagaggagagattcaacacatttggtccctcgattaaggaag 1092
||| ||||||||| ||| || |||| || |||| | |||||||| ||||||| || |
Sbjct: 2266 agagccattcaaggtaaaaaaaggacggaggcaacgaaattggtcccacgattaaagagg 2325
Query: 1093 cagggccaacagagtcattcagaggtcaataaaaatgaggaggtttcttatggccctagg 1152
||||| || ||||| ||| ||||||| || ||| ||||||| ||||||||||||||||
Sbjct: 2326 cagggacagcagagccatgcagaggttaacaaagatgagga---ttcttatggccctagg 2382
Query: 1153 gtacagacatcaaagaacactgtggacctacgtggtatgcgagtggaagaagctgccatt 1212
|| || |||||||||||||||||||| ||||| |||||||| ||||||||||||| |
Sbjct: 2383 gtccaaacatcaaagaacactgtggatctacgcggtatgcgggtggaagaagctgttctc 2442
Query: 1213 taccttgacatggccttgtctgaaagtaagccaaaatcggtcatctttgtcgtgcatggg 1272
|||| |||||||| | |||||||| |||| | || || |||||||| || ||||||
Sbjct: 2443 cacctcaacatggccatatctgaaagagagccccattcagttatctttgttgtacatggg 2502
Query: 1273 atgggaactggagctgttaagcaacgagcattggagatattaggaaagcatccatgcgtg 1332
||||| || ||||||||||||||||| |||||||||||| |||||||||||||| | |||
Sbjct: 2503 atgggtacaggagctgttaagcaacgggcattggagatactaggaaagcatccacgtgtg 2562
Query: 1333 gccaagtatgaagctgaaggtccaacgaattttggttgtacagttgcatatatcaa 1388
|||| || ||||| ||| |||||| ||||||||||||||||||||| ||||||||
Sbjct: 2563 accaattacgaagcagaaagtccaatgaattttggttgtacagttgcttatatcaa 2618