Jatropha Genome Database
- JcCA0289561.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0289561.10 + phase: 1 /pseudo/partial
(1068 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29790.m000816 Protein pim1, putative 638 0.0
>29790.m000816 Protein pim1, putative
Length = 1437
Score = 638 bits (322), Expect = 0.0
Identities = 505/566 (89%)
Strand = Plus / Plus
Query: 360 tgtgaaggactgcagggagctcgtttaataaatgcctttgcgaagtttcttgatgaagcc 419
||||||||||| ||||| ||||| |||||||||| | ||| || ||| | |||||||||
Sbjct: 613 tgtgaaggactacaggggcctcgtgtaataaatgcttatgcaaaatttttggatgaagcc 672
Query: 420 cctgagcttgtgaagatcacccaagtgtcatgtggggagtatcacacagctgccatttca 479
|||||||| |||||||| |||| ||||||||||||||||| |||||||||||||| ||
Sbjct: 673 cctgagctcgtgaagattacccgggtgtcatgtggggagtaccacacagctgccatatct 732
Query: 480 gaaaagggcgaggtctatacttggggtttaggaaatgtgggccaacttgggcacacttct 539
|||||||||||||||||||||||||| |||||| | ||||||||||||||| ||||||
Sbjct: 733 gaaaagggcgaggtctatacttggggactaggaagtacgggccaacttgggcatacttct 792
Query: 540 cttcagtccggggataaagagctactgcctaggcgagtggttgcccttgatggaattttc 599
||||| |||||| |||||||| ||||||||||||||||||| ||||||||||||||| |
Sbjct: 793 cttcaatccgggaataaagagttactgcctaggcgagtggtcgcccttgatggaattctg 852
Query: 600 ataaaggatgttgcatgtggaggtgtacacacatgtgctgtgactgagaaaggagctctt 659
|||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 853 ataacagatgttgcatgtggaggtgtacacacttgtgctgtgactcagaaaggagctctt 912
Query: 660 tatgcttggggcagtggtcaggtagggcaattgggccttggtccccaaactggatctttt 719
||||||||||| || ||||| | ||||||||||||||||| |||||||||||||| |||
Sbjct: 913 tatgcttggggtggtagtcagtttgggcaattgggccttggcccccaaactggatccttt 972
Query: 720 tcattcattccgagcgattctgaatcatttcttcgaaatatccccgctttggttcttccg 779
||||||||||| || ||| |||||||||||||||| |||||||| ||||||||| | ||
Sbjct: 973 tcattcattcccagtgatactgaatcatttcttcggaatatccctgctttggttttccca 1032
Query: 780 aatggagtgcaacttgttgcttgtggacattctcacacgcttgtttctttgagggatgga 839
| ||| ||||| |||||||||||||| ||||||||||| ||| | | |||||||||||||
Sbjct: 1033 actggtgtgcagcttgttgcttgtggccattctcacactcttatctgtttgagggatgga 1092
Query: 840 agaatacatggatggggctataatagctatgggcaggcagctaatcagaaaactacttat 899
||||||||||||||||| ||||||||||||||||||||||||||| ||||||| || |||
Sbjct: 1093 agaatacatggatggggttataatagctatgggcaggcagctaatgagaaaacaacatat 1152
Query: 900 gcttggtatccatcaccagttgactg 925
||||||||||||||||| ||||||||
Sbjct: 1153 gcttggtatccatcacctgttgactg 1178
Score = 242 bits (122), Expect = 4e-63
Identities = 176/194 (90%)
Strand = Plus / Plus
Query: 1 gtgctaatgaatttggtcaactgggagatggcactgaggagggtcgcaagtacccaaaga 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 260 gtgctaatgaatttggtcaactgggagatggcactgaggagggtaagaagtacccaaaga 319
Query: 61 gagtagaccaattggaggcagagtttgtgaaatctgtatcttgtggagcacactgcactg 120
|||| | |||||||| | ||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 320 aagtaaagcaattggaaactgagttcgtgaaatctgtatcttgtggagcacactgtactg 379
Query: 121 ctgctattgcagaaccacgtgaaaacgatggaaccatctcaaagagtagactatgggttt 180
|||| ||||||||||| |||||||| ||||||||||| |||| |||||||| |||||||
Sbjct: 380 ctgcaattgcagaacctcgtgaaaatgatggaaccatatcaactagtagactttgggttt 439
Query: 181 ggggacaaaaccaa 194
||||||||||||||
Sbjct: 440 ggggacaaaaccaa 453
Score = 149 bits (75), Expect = 4e-35
Identities = 102/111 (91%)
Strand = Plus / Plus
Query: 925 gatagtgtgacactatcgaacgctttgcagatcgaggatgttgcatctagaactggagca 984
|||||||||||| |||| || |||| | | || |||||||||||||||||||||||||||
Sbjct: 1279 gatagtgtgacattatcaaatgcttcggaaattgaggatgttgcatctagaactggagca 1338
Query: 985 gatgctttagcacgcctttgtggaagattgagggagcatttgcttgatggt 1035
||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1339 gatgccttagctcgcctttgtggaagattgagggagcatttgcttgatggt 1389
Score = 105 bits (53), Expect = 5e-22
Identities = 104/121 (85%)
Strand = Plus / Plus
Query: 229 ggatcaaattttccacgtttattttggggggccttcaaaccaaatacgattatccgtcaa 288
|||||||||| |||||||||||| | |||||||| || |||||||||||| |||||
Sbjct: 454 ggatcaaattatccacgtttattctcaggggcctttgcactgaatacgattatctgtcaa 513
Query: 289 gtgtcctgtggtgcggctcatgtggtggctttatcagaggatggcctactacaagcttgg 348
||||| |||||||| | |||||| |||||| ||||||||||||||||| | |||||||||
Sbjct: 514 gtgtcttgtggtgcagttcatgtagtggctctatcagaggatggcctattgcaagcttgg 573
Query: 349 g 349
|
Sbjct: 574 g 574