Jatropha Genome Database
- JcCA0289141.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0289141.10 - phase: 0 /partial
(1431 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29848.m004618 clathrin assembly protein, putative 607 e-173
>29848.m004618 clathrin assembly protein, putative
Length = 1989
Score = 607 bits (306), Expect = e-173
Identities = 607/706 (85%), Gaps = 6/706 (0%)
Strand = Plus / Plus
Query: 732 agaggaaagaagggcagttactccattgagggaaatgaaacctgagagaatttttggcaa 791
|||||| |||| ||||| || |||||||||||||||||| |||||| || ||||| ||
Sbjct: 705 agaggatagaaaagcagtgacgccattgagggaaatgaaagttgagaggatatttggaaa 764
Query: 792 gatggctcatttgcagaggttattggataggttcttgtcatgtcggcctactggattagc 851
||||| |||||||| ||||| |||||||||||||| |||||||||| || || |||||
Sbjct: 765 aatggcacatttgcaaaggttgctggataggttcttggcatgtcggccaacggggttagc 824
Query: 852 caagaacagcagaatgatactaattgcgctttatccagttgtgagggagagttttcagtt 911
|||||||| || ||| | | |||||||||||||| ||||||| ||||||||||||||
Sbjct: 825 taagaacagtaggatggttttgattgcgctttatcctgttgtgaaagagagttttcagtt 884
Query: 912 gtatgcagatatatgtgaggttttggctgttttgttggacaaattctttgacatggagta 971
|||||| || |||||||||||||||||||||||| | || ||||||||||| ||||||||
Sbjct: 885 gtatgctgacatatgtgaggttttggctgttttgcttgataaattctttgatatggagta 944
Query: 972 tccagattgtgtgaaggcctttgatgcttatgccagtgcagggaaacagattgatgagct 1031
||| ||||| || ||||| |||||||||||||| ||||| | ||||||||||||||| |
Sbjct: 945 tcctgattgcgttaaggcttttgatgcttatgctagtgctgccaaacagattgatgagtt 1004
Query: 1032 aattatattttataattggtgtaaggatactggtgtggctagatcctcagagtatccaga 1091
|||||| |||||||||||||| ||||||||||||||| ||||||| || |||||||| ||
Sbjct: 1005 aattatgttttataattggtgcaaggatactggtgtgtctagatcatccgagtatccgga 1064
Query: 1092 tgtgcagaagattactagtaaattgttggaaactttggaggagtttgtcagggatagggc 1151
||||||||| ||||| |||||||||||||| ||||| ||||||||||| |||||||| ||
Sbjct: 1065 tgtgcagaaaattaccagtaaattgttggagactttagaggagtttgtgagggatagagc 1124
Query: 1152 caagcggcccaagagccctgagaggaaagag---gaggctcctcctgtggctcaagagga 1208
|| ||||| ||||| || ||||||||||| ||| |||||||||| ||||| |||||
Sbjct: 1125 taaacggcctaagagtccggagaggaaagaattagagcctcctcctgttgctcaggagga 1184
Query: 1209 agagcctgtacctgatatgaacgaaattaaggcattgcctccgcctgagaattacactcc 1268
||||||||||||||||||||| || ||||| ||||||||||| || ||| |||| |||||
Sbjct: 1185 agagcctgtacctgatatgaatgagattaaagcattgcctcctccagaggattatactcc 1244
Query: 1269 tcctccccctcctgagccagagcc---tacacctcagcaaccgcaggttgctgaagattt 1325
|||||| ||| ||||||| ||||| || |||| ||||| |||||| ||| |||||
Sbjct: 1245 tcctccacctgctgagccggagccgcctaagcctccacaaccacaggttactggtgattt 1304
Query: 1326 ggtgaatttgagggacgatgttgtctctgcagatgatcaaggaaatagattggcattggc 1385
|||||||||||| || |||| ||||||||| ||||||||||| ||||| || || |||||
Sbjct: 1305 ggtgaatttgagagatgatgctgtctctgctgatgatcaagggaataggtttgctttggc 1364
Query: 1386 tttgtttgctgggccacctgctaataatggaaatggatcatgggaa 1431
|||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 1365 tttgtttgctggaccacctgctaataatggaaatggatcctgggaa 1410
Score = 262 bits (132), Expect = 5e-69
Identities = 375/456 (82%)
Strand = Plus / Plus
Query: 1 atggcgccgagcacaatccgcaaagctatcgggaccgttaaggatcaaacaagtattggc 60
||||| |||||||| ||| | || || ||||| ||||||||||||||||| || || ||
Sbjct: 1 atggcaccgagcacgatcaggaaggcgatcggcaccgttaaggatcaaaccagcatcgga 60
Query: 61 atagccaaggtggcaagtaacatggcaccggagctagaagtggcgatagtgaaggcgacg 120
||||| || |||||||| ||||||||||| ||||||||||| || ||||| || |||||
Sbjct: 61 atagcgaaagtggcaagcaacatggcaccagagctagaagttgcaatagtaaaagcgaca 120
Query: 121 agccacgacgatgatccggcgaatgagaaatacataagagagatcttgaacttgacatcg 180
||||||||||||||||| || || ||||| ||||||||||||||||| ||||| |||||
Sbjct: 121 agccacgacgatgatcctgcaaacgagaagtacataagagagatcttaaacttaacatcc 180
Query: 181 tattctcgtggatacgtgcacgcctgtgtggcggcggtgtcgaagcggctggggaagacg 240
| ||| |||||||| | ||||||||||| || || || |||||||| || ||||||||
Sbjct: 181 tgttcacgtggatatatacacgcctgtgttgcagcagtttcgaagcgtcttgggaagaca 240
Query: 241 agggactggattgtggcgctcaaggcgctgatgctgattcacaggctgttaaacgatgga 300
|| ||||||||||| ||||| || ||| | ||||| |||| ||| ||||||| || |
Sbjct: 241 agagactggattgtagcgctgaaagcgttaatgcttgttcataggttgttaaatgaagcg 300
Query: 301 gatccattgtttcaagaagaaatactgtatgctacaaggaggggaactaggcttttgaat 360
||||| ||||||| ||||| || | || ||||||||||| || || ||| | ||||
Sbjct: 301 gatccgctgtttcaggaagagatcttatacgctacaaggagagggacgagggtactgaac 360
Query: 361 atgtctgattttcgagatgaggcccactcgagttcgtgggatcattctgccttcgtaagg 420
|||||||||||| ||||||| || || || ||||| ||||||||||| || || || ||
Sbjct: 361 atgtctgattttagagatgaagcgcattccagttcctgggatcattcggcttttgttaga 420
Query: 421 acttatgccatgtatttagatcagagacttgaattg 456
|||||||| |||||||| ||||||||||||||||||
Sbjct: 421 acttatgctatgtatttggatcagagacttgaattg 456