Jatropha Genome Database
- JcCA0287971.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0287971.10 + phase: 0
(657 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29912.m005421 Charged multivesicular body protein 4b, putative 692 0.0
>29912.m005421 Charged multivesicular body protein 4b, putative
Length = 657
Score = 692 bits (349), Expect = 0.0
Identities = 580/657 (88%)
Strand = Plus / Plus
Query: 1 atgtttaaccggctctttggtaaacctaagcaggaaaccaatgctctaaccacgttagac 60
|||||||||||||| ||||| ||||| || |||||||| ||||||||||| |||||||||
Sbjct: 1 atgtttaaccggctttttggaaaaccaaaacaggaaactaatgctctaactacgttagac 60
Query: 61 aaattaaatgagacgcttgaaatgctagagaaaaaggaaaaagtacttataaaaaaggct 120
|||||||||||||| ||||| ||| |||||||||| || ||||||||| |||||| |||
Sbjct: 61 aaattaaatgagacacttgagatgttagagaaaaaagagaaagtactttcaaaaaaagct 120
Query: 121 gcagcagaagttgaaaaggccagggagttcacacgagcaagaaacaaaagagcggctatt 180
||||||||||||| ||| | || || || ||| ||| ||||||||||| ||||||
Sbjct: 121 attgcagaagttgaaagggcaaaagaatttactcgaacaaagaacaaaagagctgctatt 180
Query: 181 caatgtttgaagagaaagaggctatatgaacaacaaatagaacagcttggaaatttccaa 240
|||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caatgtctgaagaggaaaaggctatatgaacaacaaatagaacagcttggaaatttccaa 240
Query: 241 ctgcgtattcatgatcagatgataatgttagaaggtgcaaaagccactacagaaactgtg 300
|| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctccgtattcatgatcaaatgataatgttagaaggtgcaaaagccactacagaaactgta 300
Query: 301 gacgcattgagaactggagcagctgcaatgaaggcaatgcaaaaggcgacaaacatcgat 360
|| ||||||||||||||||| |||||||||||||||||||| || || || || || ||
Sbjct: 301 gatgcattgagaactggagccgctgcaatgaaggcaatgcagaaagcaacgaatattgac 360
Query: 361 gatgtggacaagaccatggatgagatcaatgagcagacggagaacatgaaacagatacaa 420
|||||||| ||||| |||||||| |||||||||||||| |||||||||||||| || |||
Sbjct: 361 gatgtggataagacgatggatgaaatcaatgagcagactgagaacatgaaacaaattcaa 420
Query: 421 gaagcactggctactcctattggtgcggcagctgattttgatgaggatgaacttgaggca 480
|| || || | |||||||||||||| |||||||||||||||||||| ||| | ||||||
Sbjct: 421 gaggctctttcaactcctattggtgctgcagctgattttgatgaggacgaattggaggca 480
Query: 481 gaactcgaagagttggaaggtgctgaattggaagaacagctccttcagcctgcaaccaca 540
||||| ||||| ||||||||||||||| |||||||||| || ||||| ||||||||||||
Sbjct: 481 gaacttgaagaattggaaggtgctgaactggaagaacaacttcttcaacctgcaaccaca 540
Query: 541 gctccagcagctccagtgcaagttccagcaggcaggcaaccagctcgccctgttcctcaa 600
|||||||||||||||||||| |||||||||||| |||||||| ||| |||| | ||||
Sbjct: 541 gctccagcagctccagtgcaggttccagcaggccggcaaccaaatcgtcctgctgctcag 600
Query: 601 aagcgcacagctgaggaagatgaacttgctgccttacaggctgagatggcactttga 657
|| | |||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 601 aaacagacagctgaggaagatgaacttgctgcattgcaggctgagatggcactttga 657