Jatropha Genome Database
- JcCA0286981.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0286981.10 + phase: 0 /partial
(529 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29908.m006240 conserved hypothetical protein 454 e-127
30142.m000632 Rho GTPase activator, putative 100 2e-20
>29908.m006240 conserved hypothetical protein
Length = 2943
Score = 454 bits (229), Expect = e-127
Identities = 337/373 (90%)
Strand = Plus / Plus
Query: 4 ttcaagagtgggcctctttttatatcatctaaaggaattgggtggacatcctggaagaag 63
||||||||||| ||||||||||| ||||| ||||||||||| ||||| || ||||||||
Sbjct: 145 ttcaagagtggacctctttttatttcatccaaaggaattggttggacgtcatggaagaaa 204
Query: 64 cggtggtttattctaacacgaacttcattggttttcttcagaagtgatccaagtactgct 123
||||||||||||||||||||||| ||| |||||||||| ||||||||||||||| ||| |
Sbjct: 205 cggtggtttattctaacacgaacctcactggttttctttagaagtgatccaagtgctgtt 264
Query: 124 cctcaaaaagggggtgaagtgaacctgactcttggtggtattgacctcaacaattcaggc 183
|||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 265 cctcaaaaagggagtgaagtgaatttgactcttggtggtattgacctcaacaattcaggc 324
Query: 184 agtgtggttgtcaaagcagacaaaaagctcttgactgttctctttcctgatggccgtgac 243
|||||||| || || |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 325 agtgtggtagtgaagtcagacaaaaaactcttgactgttctctttcctgatggccgtgat 384
Query: 244 gggcgaactttcactcttaaggctgaaacatcggaagatttatatgagtggaagactgcg 303
|||||| ||||||| |||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 385 gggcgagctttcacgcttaaggctgaaacgatggaagatttatatgattggaagactgcc 444
Query: 304 ctcgaaaatgctctggcacaagcaccaagtgcttgtcttgcgatggggcaaaatggtatc 363
|| || |||||| |||||||||||||||||||| |||| ||||||||||||||| |||
Sbjct: 445 cttgagaatgctttggcacaagcaccaagtgctgcacttgtgatggggcaaaatggcatc 504
Query: 364 ttcaagaatgatc 376
|||||||||||||
Sbjct: 505 ttcaagaatgatc 517
Score = 145 bits (73), Expect = 3e-34
Identities = 88/93 (94%)
Strand = Plus / Plus
Query: 437 tggtcattggcagaccagttttactagctttagaagatgttgatggatctccttcttttc 496
|||||||||||||||||||||| || ||||||||||||||||||||| |||| |||||||
Sbjct: 590 tggtcattggcagaccagttttgcttgctttagaagatgttgatggaactccatcttttc 649
Query: 497 tagaaaaggctcttaggtatatagaagagcatg 529
|||| ||||||||||||||||||||||||||||
Sbjct: 650 tagagaaggctcttaggtatatagaagagcatg 682
>30142.m000632 Rho GTPase activator, putative
Length = 2466
Score = 99.6 bits (50), Expect = 2e-20
Identities = 95/110 (86%)
Strand = Plus / Plus
Query: 226 tttcctgatggccgtgacgggcgaactttcactcttaaggctgaaacatcggaagattta 285
||||||||||| ||||| |||||| | |||||||| |||||||| ||||| || ||||||
Sbjct: 118 tttcctgatgggcgtgatgggcgagcattcactctcaaggctgagacatcagaggattta 177
Query: 286 tatgagtggaagactgcgctcgaaaatgctctggcacaagcaccaagtgc 335
||||||||||| || || || ||| |||| || |||||||||||||||||
Sbjct: 178 tatgagtggaaaacggctcttgaacatgcccttgcacaagcaccaagtgc 227