Jatropha Genome Database
- JcCA0286951.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0286951.10 + phase: 0
(591 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29739.m003713 Auxin response factor, putative 672 0.0
30185.m000956 Auxin response factor, putative 107 7e-23
29599.m000177 Auxin response factor, putative 72 4e-12
30170.m014161 Auxin response factor, putative 56 2e-07
>29739.m003713 Auxin response factor, putative
Length = 3360
Score = 672 bits (339), Expect = 0.0
Identities = 497/551 (90%), Gaps = 9/551 (1%)
Strand = Plus / Plus
Query: 1 atgaaggctcctccaaatggttttatgtcaaattctgcagaaggagaaaggaagagtatt 60
||||||| |||||||||||| |||||| | ||||||||||||||||||||||||||||||
Sbjct: 1 atgaaggttcctccaaatgggtttatggcgaattctgcagaaggagaaaggaagagtatt 60
Query: 61 aattcagagctatggcatgcatgtgcggggccgctggtctctctgcctccagttggaagt 120
|||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||
Sbjct: 61 aattcagagctatggcatgcctgtgcggggccgctggtggctctacctccagttggaagt 120
Query: 121 cttgtagtttacttcccccaaggccacagtgagcaagtcgcagcatctatgcaaaaggag 180
|||||||||||||| || |||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 121 cttgtagtttactttcctcaaggccatagtgagcaagttgcagcatcaatgcaaaaggag 180
Query: 181 actgattttataccaagctatcccaaccttccttccaagttgatttgtatgcttcataat 240
|||||||| ||||||||||| |||||||||||||| ||||||||||| |||||||| |||
Sbjct: 181 actgatttcataccaagctaccccaaccttccttcaaagttgatttgcatgcttcacaat 240
Query: 241 gtcacattgcatgctgatgcagaaactgatgaggtctatgctcagatgacccttcaacct 300
||||| | ||||||||||||||||||||||| |||||||| || |||||||||||||||
Sbjct: 241 gtcacgctacatgctgatgcagaaactgatgaagtctatgcccaaatgacccttcaacct 300
Query: 301 ---------tatgacaaggaagcattactggcatctgatatgggcctcaagcaaagcagg 351
||||| || ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 301 gtaaataaatatgataaagaagcattactggcatctgatatgggcctcaagcaaagccgg 360
Query: 352 caacctgccgaattcttttgcaaaactctcacagctagtgacacaagtacacatggtgga 411
|||||| | || ||||| |||||||| || || |||||||||||||| ||||| ||||||
Sbjct: 361 caacctactgagttcttctgcaaaacacttacggctagtgacacaagcacacacggtgga 420
Query: 412 ttctccgtacctcgccgagcagctgagaagattttcccaccactagatttttcaatgcaa 471
||||| |||||||| ||||||||||||||||| || ||||| ||||| ||||||||||||
Sbjct: 421 ttctctgtacctcgacgagcagctgagaagatatttccacctctagacttttcaatgcaa 480
Query: 472 ccacctgcccaggagctggtagccagggatttacatgataatacatggacatttagacat 531
|||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 481 ccacctgctcaggagctggtagccagagatttacatgataatacatggacgtttagacat 540
Query: 532 atttatcgcgg 542
|||||||||||
Sbjct: 541 atttatcgcgg 551
>30185.m000956 Auxin response factor, putative
Length = 3330
Score = 107 bits (54), Expect = 7e-23
Identities = 132/158 (83%)
Strand = Plus / Plus
Query: 382 acagctagtgacacaagtacacatggtggattctccgtacctcgccgagcagctgagaag 441
||||| |||||||||||||| ||||| || || || || ||||| || ||||||||||||
Sbjct: 430 acagcaagtgacacaagtactcatggaggcttttctgtgcctcgacgtgcagctgagaag 489
Query: 442 attttcccaccactagatttttcaatgcaaccacctgcccaggagctggtagccagggat 501
|||||||| || || ||||| || |||||||| ||||| || || || ||||||||||||
Sbjct: 490 attttccctcctcttgatttctccatgcaaccgcctgctcaagaacttgtagccagggat 549
Query: 502 ttacatgataatacatggacatttagacatatttatcg 539
|| |||||||||| ||||| ||| | ||||| |||||
Sbjct: 550 ttgcatgataatatctggacttttcgtcatatctatcg 587
Score = 54.0 bits (27), Expect = 1e-06
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 238 aatgtcacattgcatgctgatgcagaaactgatgaggtctatgctcagatgacccttcaa 297
||||| ||||| ||||| || |||||||||| || || ||||||||||||||||| |||
Sbjct: 277 aatgtgacattacatgcggacccagaaactgacgaagtttatgctcagatgaccctccaa 336
Query: 298 cct 300
|||
Sbjct: 337 cct 339
>29599.m000177 Auxin response factor, putative
Length = 1437
Score = 71.9 bits (36), Expect = 4e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 373 aaaactctcacagctagtgacacaagtacacatggtggattctccgtacctcgccgagca 432
|||||||| || |||||||| |||||||| ||||||||||| || || |||||||| |||
Sbjct: 385 aaaactctgacggctagtgatacaagtactcatggtggattttcagtccctcgccgggca 444
Query: 433 gctgagaa 440
||||||||
Sbjct: 445 gctgagaa 452
>30170.m014161 Auxin response factor, putative
Length = 2853
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 248 tgcatgctgatgcagaaactgatgaggtctatgctcagatgacccttcaacc 299
|||||||||| ||| ||||||||| ||||||||||||||| |||||||||
Sbjct: 317 tgcatgctgacagagatactgatgagatctatgctcagatgagccttcaacc 368
Score = 54.0 bits (27), Expect = 1e-06
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 464 caatgcaaccacctgcccaggagctggtagccagggatttacatgataatacatggacat 523
||||||||||||| | || ||||| || | ||| || || |||||||||||||||||||
Sbjct: 539 caatgcaaccaccaactcaagagcttgttgtcagagacttgcatgataatacatggacat 598
Query: 524 ttagacatatttatcgcgg 542
|| | ||||| ||||||||
Sbjct: 599 ttcgtcatatatatcgcgg 617