Jatropha Genome Database

JcCA0286251.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0286251.20 - phase: 0 
         (483 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29912.m005468 conserved hypothetical protein                          424   e-118

>29912.m005468 conserved hypothetical protein
          Length = 1530

 Score =  424 bits (214), Expect = e-118
 Identities = 423/495 (85%), Gaps = 12/495 (2%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgcaagtaattcctcgaagtgcatctgaagctactttatatgatgggagggtgttagaa 60
            |||||||||||| | |||| | |||||||||||||  | |||||| |||||    |||||
Sbjct: 1036 atgcaagtaatttcgcgaaattcatctgaagctacactgtatgataggaggacaatagaa 1095

                                                                        
Query: 61   cgagttaaaggtgaaggcaaacagcacattacagaagaaggctcctcttctcagactgaa 120
            || || ||  |||| || |||||||||||| |||||||||| ||||||||||| ||||||
Sbjct: 1096 cgggtcaagagtgacggaaaacagcacattgcagaagaaggttcctcttctcatactgaa 1155

                                                                        
Query: 121  gaagatgtaaagggaagcagcatgacccttagggcaaaagat------------tcaaca 168
            || |||| |||  ||||| |||||| ||||||| ||||||||            ||| ||
Sbjct: 1156 gatgatgcaaaaagaagcggcatgaaccttaggtcaaaagatgcatctggcccatcagca 1215

                                                                        
Query: 169  gcagaaggtttctcttttgatttttctgccataaagccaggtattgcatcagacttgaaa 228
            ||||||| ||  |||||||||||||||||||||||||||||||||||||||||  |||||
Sbjct: 1216 gcagaagattcgtcttttgatttttctgccataaagccaggtattgcatcagatgtgaaa 1275

                                                                        
Query: 229  tttgggggttgtggttcctatccaaatttaccatgggtttcaaccacaggttctggccca 288
            |||||||||||||| |||||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 1276 tttgggggttgtggctcctatccaaatttgccatgggtgtctaccacaggttctggccca 1335

                                                                        
Query: 289  aacggcagaacaatttctggtgtaacgtatagatacagtgcaaatcaaataagaatcgtg 348
            || ||||||||||||||||||||||| || |||||||||||||| ||||| ||||| || 
Sbjct: 1336 aatggcagaacaatttctggtgtaacatacagatacagtgcaaaccaaatcagaattgtc 1395

                                                                        
Query: 349  tgtgcttgccacggttcccatatgtcccctgaggaatttgttaggcatgctaatgaagag 408
            |||||||| || |||||||| ||||| |||||||| |||||||||||||| |||||||||
Sbjct: 1396 tgtgcttgtcatggttcccacatgtctcctgaggagtttgttaggcatgcaaatgaagag 1455

                                                                        
Query: 409  aatgctaatgcagaaaatggcagtggtttagcctcatttccaagcactaaccctgctgcc 468
            |||| |||| ||||||||||||||  |||||||||||||||||| |  || |||||||||
Sbjct: 1456 aatgttaattcagaaaatggcagtaatttagcctcatttccaagtaacaatcctgctgcc 1515

                           
Query: 469  tccgctcagagctaa 483
            || ||||||||||||
Sbjct: 1516 tctgctcagagctaa 1530