Jatropha Genome Database

JcCA0285281.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0285281.10 + phase: 0 /partial
         (388 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29585.m000583 amino acid binding protein, putative                    210   5e-54

>29585.m000583 amino acid binding protein, putative
          Length = 1263

 Score =  210 bits (106), Expect = 5e-54
 Identities = 309/377 (81%), Gaps = 6/377 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtattccgaccagcgacgatgtggttttaatccaacatgctaaaacctccgccgac 60
           |||||||| |||| ||||||||| || ||||| ||  |||  || |||| ||||| ||| 
Sbjct: 1   atgggtatgccgagcagcgacgacgttgttttgattgaaccagccaaaaactccggcgat 60

                                                                       
Query: 61  ccctctgtcgtcaccgtcaattgccccgacaaggccggcctcggctgcgatctctgccgt 120
           ||| | || || ||||| |||||||| ||  |||| || ||||||||||| || ||||||
Sbjct: 61  cccaccgttgttaccgttaattgccctgatcaggctggtctcggctgcgacctttgccgt 120

                                                                       
Query: 121 ataattctcgagtttggcctttccatcactcgtgctgatttttcaacagatggaagatgg 180
           || || || |||||||| ||||||||  ||||||||||||||||||||||||||||||||
Sbjct: 121 attatccttgagtttgggctttccatttctcgtgctgatttttcaacagatggaagatgg 180

                                                                       
Query: 181 tgttacatagtattttgggtggttccagactcgacctcttcatcacataagctcgattgg 240
           ||||||||||||||||||||||||||| |      |||| | ||||||||  |  |||||
Sbjct: 181 tgttacatagtattttgggtggttccaca------ctctacttcacataaagttaattgg 234

                                                                       
Query: 241 gatagcttgaaaaaccggctctcttttgcttcccctccctgtttgattccattctatttt 300
           |||||||| |||||| |||| |||| |||||| ||||| ||||||  |||||||||||| 
Sbjct: 235 gatagcttaaaaaacaggctttcttgtgcttcacctccttgtttgggtccattctatttc 294

                                                                       
Query: 301 gatcagaaatctaatggtccgtcgttgcctcccctctatttgttgaaattttgttttgtt 360
           |||||||| ||||||| | | ||  ||||| |  | ||| | ||||| ||||||||||||
Sbjct: 295 gatcagaagtctaatgttacttccgtgccttcattgtatctcttgaagttttgttttgtt 354

                            
Query: 361 gaccggaaaggattact 377
           ||| |||||||| ||||
Sbjct: 355 gacaggaaaggactact 371