Jatropha Genome Database

JcCA0285211.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0285211.10 + phase: 0 
         (351 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28166.m001095 conserved hypothetical protein                          194   2e-49

>28166.m001095 conserved hypothetical protein
          Length = 1572

 Score =  194 bits (98), Expect = 2e-49
 Identities = 224/266 (84%)
 Strand = Plus / Plus

                                                                       
Query: 82  gaccctgcctctgatccttctcttctccaatctattaaaagattatacgagttgtgtaag 141
           |||||||| |||||||||||||||||||||||  | | ||   || | || |||||||| 
Sbjct: 85  gaccctgcttctgatccttctcttctccaatccgtgagaaagctacatgaattgtgtaaa 144

                                                                       
Query: 142 caagagaattctgaggatttggtggctagggtttatcctcaaattaataggctatttcaa 201
            |||||||||| ||||| ||  | || || ||||||||||||||||| || || ||||||
Sbjct: 145 aaagagaattcagaggacttaatagcgagagtttatcctcaaattaacagactctttcaa 204

                                                                       
Query: 202 cgctctgttaattcgcttgctcaatctaagtcctcttatggacttctcttactggccatt 261
           ||||| |||  ||| ||| |||||||||  ||  |||||||||||||||| ||||| |||
Sbjct: 205 cgctcagttgcttctctttctcaatctacctctgcttatggacttctcttgctggctatt 264

                                                                       
Query: 262 cttcaattttttcttgattttggtgaggtggttcttcatgatgctgatcccagtctaaag 321
           ||||||||||| || |||||||| ||||||||||| |||||||||||||| ||||| |||
Sbjct: 265 cttcaatttttcctcgattttggagaggtggttctgcatgatgctgatcctagtctgaag 324

                                     
Query: 322 acgtttttccgttcatgtttgagccg 347
           || |||||||| ||||||||||||||
Sbjct: 325 acatttttccgctcatgtttgagccg 350