Jatropha Genome Database

JcCA0283321.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0283321.10 - phase: 0 /partial
         (339 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29989.m000426 solanesyl diphosphate synthase, putative                208   2e-53

>29989.m000426 solanesyl diphosphate synthase, putative
          Length = 1263

 Score =  208 bits (105), Expect = 2e-53
 Identities = 177/201 (88%)
 Strand = Plus / Plus

                                                                       
Query: 137 ctagaaggttgcgctgctgccggcgagatattgctcggtgtagagtttcttccacaaaga 196
           ||||||| ||||  || |||||||||||   |||| | |||||||| || || |||||||
Sbjct: 152 ctagaagattgctttgttgccggcgagactctgctagatgtagagtatcctctacaaaga 211

                                                                       
Query: 197 cccctgagactctgcctaatggagttgctcaaggtcctgtaacacttctggatttgaagg 256
           ||||||||||| ||| ||||||||||||| ||||||||| |||| |  ||||||||||||
Sbjct: 212 cccctgagactgtgcttaatggagttgctaaaggtcctgcaacattgttggatttgaagg 271

                                                                       
Query: 257 agtcaaaaggccctatttcattgaaaaatttgtttgaagtggttgctgacgatctccaga 316
           ||||||||||||| |||||| ||||||| |||||||||||||||||||| ||||||||||
Sbjct: 272 agtcaaaaggcccaatttcagtgaaaaacttgtttgaagtggttgctgatgatctccaga 331

                                
Query: 317 ctcttaaccacaacctccggt 337
           |||||||||| ||||||||||
Sbjct: 332 ctcttaaccaaaacctccggt 352



 Score =  113 bits (57), Expect = 7e-25
 Identities = 99/113 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatgtcaatgacatgccgaagtattgattttggaaggactctgcttgatttggcggct 60
           ||||||||||||||||| |  ||| |||||||||| |||||| | ||||||||||| |||
Sbjct: 1   atgatgtcaatgacatgtcagagtcttgattttgggaggactgtacttgatttggcagct 60

                                                                
Query: 61  tgtgggtgttcctccaatgcttcaatagacaggtattcagtaaggaactatgc 113
           |||||||| || ||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 61  tgtgggtgctcttccaatgcttcaatagataggtactcagtgaggaattatgc 113