Jatropha Genome Database

JcCA0283241.10
Show Alignment: 
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0283241.10 + phase: 1 /pseudo/partial
         (380 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29801.m003183 cytochrome P450, putative                               276   9e-74
30170.m013873 cytochrome P450, putative                               107   5e-23
30115.m001196 cytochrome P450, putative                                72   3e-12
29801.m003223 cytochrome P450, putative                                68   4e-11

>29801.m003183 cytochrome P450, putative
          Length = 1416

 Score =  276 bits (139), Expect = 9e-74
 Identities = 247/283 (87%)
 Strand = Plus / Plus

                                                                        
Query: 82   tgttcaggaacattcatcacaatccaaagttctttcctgatcctcatatttttgacccat 141
            |||||||||| ||||||||||||||| |  | |||||||||||| | |||||||||||||
Sbjct: 1130 tgttcaggaatattcatcacaatccagaactatttcctgatcctgacatttttgacccat 1189

                                                                        
Query: 142  caaggtttgaggttcctccaaaacccaataccttcattccatttggcaatggagttcatg 201
            |||| |||||||||||||| ||||||||||| ||||||||||||||||| ||||  ||||
Sbjct: 1190 caagatttgaggttcctccgaaacccaatactttcattccatttggcaacggagcgcatg 1249

                                                                        
Query: 202  cttgtcctggtaatgaacttgctaagttggagatgctaatcatgatccatcatctagtaa 261
            |||||||||| |||| |||||| ||| |||||||||| ||| | || ||||||||||| |
Sbjct: 1250 cttgtcctggcaatggacttgcaaagatggagatgctcatcttcattcatcatctagtta 1309

                                                                        
Query: 262  ccaaattcaggtgcgaagtggtgggatcaggagatggaattcaatatgacccatttccag 321
            | |||||||| || |||||||  |||||||  ||||| |||||||||| |||||||||||
Sbjct: 1310 ctaaattcagatgggaagtggaaggatcagtggatgggattcaatatggcccatttccag 1369

                                                       
Query: 322  tgccccagaaaggactaccagccagattttggccagaaacaaa 364
            |||||||  ||||||||||||| |||||||||| |||| ||||
Sbjct: 1370 tgccccaacaaggactaccagcaagattttggcaagaatcaaa 1412



 Score =  111 bits (56), Expect = 3e-24
 Identities = 62/64 (96%)
 Strand = Plus / Plus

                                                                        
Query: 8    tagagagtttaagaatggcaagcattatatctttttccttcagggaagcaataatggatg 67
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 1022 tagagagtttaagaatggcaagcattatatcttttgccttcagggaagcaataattgatg 1081

                
Query: 68   ttga 71
            ||||
Sbjct: 1082 ttga 1085


>30170.m013873 cytochrome P450, putative
          Length = 1368

 Score =  107 bits (54), Expect = 5e-23
 Identities = 216/270 (80%)
 Strand = Plus / Plus

                                                                        
Query: 84   ttcaggaacattcatcacaatccaaagttctttcctgatcctcatatttttgacccatca 143
            |||||||||||||||||||||||| | |  |||  |||| |||| |  ||||| || || 
Sbjct: 1078 ttcaggaacattcatcacaatccagaatattttagtgattctcaaaaatttgatccctcg 1137

                                                                        
Query: 144  aggtttgaggttcctccaaaacccaataccttcattccatttggcaatggagttcatgct 203
            || ||||||||| | |||||||| ||||| || || ||||| || |||||||| ||||||
Sbjct: 1138 agatttgaggttgcaccaaaacctaatacatttatgccattcggaaatggagtccatgct 1197

                                                                        
Query: 204  tgtcctggtaatgaacttgctaagttggagatgctaatcatgatccatcatctagtaacc 263
            || || || ||||| ||||| ||| |||| ||||| || || | ||||||| | || |||
Sbjct: 1198 tgcccaggaaatgagcttgccaagctggaaatgcttattattacccatcatttggtgacc 1257

                                                                        
Query: 264  aaattcaggtgcgaagtggtgggatcaggagatggaattcaatatgacccatttccagtg 323
            || ||||| || |||||||| |||||   | |||| ||||| |||| |||||||||||||
Sbjct: 1258 aagttcagatgggaagtggtaggatctcaaaatgggattcagtatggcccatttccagtg 1317

                                          
Query: 324  ccccagaaaggactaccagccagattttgg 353
            ||   | | ||||| |||||||||||||||
Sbjct: 1318 cctgtgcatggacttccagccagattttgg 1347


>30115.m001196 cytochrome P450, putative
          Length = 1413

 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 126/156 (80%)
 Strand = Plus / Plus

                                                                        
Query: 81   ctgttcaggaacattcatcacaatccaaagttctttcctgatcctcatatttttgaccca 140
            |||||| | |||||||||||||||||||| |||||    ||||| ||| | ||| | || 
Sbjct: 1111 ctgttccgaaacattcatcacaatccaaatttcttcagagatccacatgtatttaatcct 1170

                                                                        
Query: 141  tcaaggtttgaggttcctccaaaacccaataccttcattccatttggcaatggagttcat 200
            ||||| |||||||||   |||||||| ||||| ||||| || ||||| ||||| ||||||
Sbjct: 1171 tcaagatttgaggttggaccaaaaccgaatactttcatgccctttggaaatggtgttcat 1230

                                                
Query: 201  gcttgtcctggtaatgaacttgctaagttggagatg 236
            || ||||| || |||||| |||| ||| | ||||||
Sbjct: 1231 gcatgtccaggaaatgaagttgccaagctagagatg 1266


>29801.m003223 cytochrome P450, putative
          Length = 1407

 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                        
Query: 132  tttgacccatcaaggtttgaggttcctccaaaacccaataccttcattccatttggcaat 191
            ||||| || ||||| ||||||||| | |||||||||||||| ||||| ||||||||||||
Sbjct: 1174 tttgatccttcaagatttgaggttgcaccaaaacccaatacattcatgccatttggcaat 1233

              
Query: 192  gg 193
            ||
Sbjct: 1234 gg 1235