Jatropha Genome Database
- JcCA0282511.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0282511.10 + phase: 0
(1818 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30147.m013967 Polygalacturonase-1 non-catalytic subunit beta pre... 890 0.0
29631.m001034 Polygalacturonase non-catalytic subunit AroGP2 pre... 76 8e-13
29631.m001036 Polygalacturonase-1 non-catalytic subunit beta pre... 56 8e-07
>30147.m013967 Polygalacturonase-1 non-catalytic subunit beta
precursor, putative
Length = 1914
Score = 890 bits (449), Expect = 0.0
Identities = 1439/1767 (81%), Gaps = 9/1767 (0%)
Strand = Plus / Plus
Query: 48 gttgaaccctttttcccctaaagcttctttgatccgttattggaacaaacacatctctaa 107
||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 135 gttgaacccattttctcctaaagcatctttgatccgttattggaacaaacacatctttaa 194
Query: 108 ctcactacctaacccgccatttcttttctctaaagcttctccactcactgccattgactc 167
| | | ||||| | |||||||| |||| |||||||||||||| ||||| || |||||
Sbjct: 195 caccttgcctaaatcaccatttctcctctccaaagcttctccacttactgcgatagactc 254
Query: 168 agctttcttctccaaactcgctactcacaactcactgtcttcacattttgattcgttctg 227
||| ||| |||||| ||||||||| || |||||||| ||||| |||||||| || |||||
Sbjct: 255 agcgttcctctccagactcgctacccaaaactcactctcttcgcattttgaatctttctg 314
Query: 228 ttcctcggctaatttattctgttcatttgactccaaagc--tgaact-agcc------aa 278
||||| || ||||||||||| || |||||||| ||| | |||| | || | ||
Sbjct: 315 ttccttagccaatttattctgctcctttgactcaaaaccaatgaatttaggcgataaaaa 374
Query: 279 tcataacaaagatgccaactttgcactttactccaacaaacgcttttcaaattatggcgg 338
| | || |||||||| ||||||||||| ||||||||||||| || |||| ||||| |
Sbjct: 375 tgacaataaagatgcaaactttgcactatactccaacaaacagttcgcaaactatgggag 434
Query: 339 gtcacgatccggaggtgttgactcgttcaagaactactccaacggattgaactccgtaac 398
||| | | |||||| ||||||||||||||||| ||||| || || |||||||| || |
Sbjct: 435 gtctcaactcggaggggttgactcgttcaagaattactcaaatggcttgaactctgtttc 494
Query: 399 cgactcgttcattaagtacagccgtgacgggacaggccacagcgaaacattcacaaatta 458
|||||||| | ||||||||||| |||| |||||||| || ||| |||||||||||||
Sbjct: 495 tgactcgtttgtaaagtacagccgcgacgcaacaggccatagtgaagcattcacaaatta 554
Query: 459 tgctgctgatgcgaacgtagctaatgcaacatttggaaactacggcactggtgccactgg 518
|||| |||||| || || || |||||||| ||||| ||||||||| ||||||| |||||
Sbjct: 555 tgctactgatggaaatgttgccaatgcaacctttggcaactacggcgctggtgcaactgg 614
Query: 519 cggctccggcgagttcaagaactatgacgaccgagtcaacgtaccgggtcttcgatttac 578
||||| |||| ||||| |||||||||||||||||||| ||||| ||||| || || ||
Sbjct: 615 aggctctggcgtcttcaaaaactatgacgaccgagtcaatgtaccaggtctgcgtttcac 674
Query: 579 cacatatgactccgatggcaataaccataagctatcattttcacattacagtggagagac 638
||||||||| || |||||||||||||||||||||||||||||| || ||||| || ||
Sbjct: 675 cacatatgattctgatggcaataaccataagctatcattttcaagctatagtggggatac 734
Query: 639 gaattctggatctcaaacattcacaagctatggaaagaaaggaaatgcagttccatctga 698
||||| || ||| || | ||||| || ||||||||||||||||||| |||||| | ||
Sbjct: 735 aaattccgggtctgaatcgttcactagttatggaaagaaaggaaatggggttccagcgga 794
Query: 699 gttcataaactatagcgaagattcaaatattattgattccacattcacgggttatggcga 758
|| || |||||| | ||||||||| || ||||| || ||||| || |||||||| ||
Sbjct: 795 atttgcaacctatagtggagattcaaacataattgaatctacatttactggttatgggga 854
Query: 759 gttgggtaatgtagctaatgactcgttcactggttatggcgtttcaggcaacaacccaca 818
|| ||||||||||| ||||| || | || ||||| | || || |||||||||||
Sbjct: 855 attaggtaatgtagcaaatgatagttttgcagggtatggtctctcgggtaacaacccaca 914
Query: 819 tactaatttcaagagttacggcgctggagaaaatgccgctagtgatagcttctcgaacta 878
|| ||||||||||||||| ||| |||| | |||| | |||| |||||| ||||| | |||
Sbjct: 915 taataatttcaagagttatggcactggtggaaattctgctattgatagtttctctagcta 974
Query: 879 cagaaatggcgccaatgttggtcaagattcatttcagtcttatgcgaagaatgcaaatgc 938
||| ||||| || ||||||||||||||||||||||| |||||||| | |||| |||||||
Sbjct: 975 caggaatggagctaatgttggtcaagattcatttcaatcttatgccaggaatacaaatgc 1034
Query: 939 ggggaaagttagttttacaaattatgggaaaacattcaatcctggaaatgacacgtttaa 998
|| |||||||| || || ||||||||||||||||| || || || ||||| || |||||
Sbjct: 1035 aggcaaagttagcttcactaattatgggaaaacatttaaccccggtaatgatacatttaa 1094
Query: 999 agaatatggcaagggatctaagggtctcaccactgttggattcaagatttacggtcccga 1058
||||||||| |||||||| |||||| ||| ||||||| ||||| ||||| ||||| ||
Sbjct: 1095 agaatatggtaagggatcaaagggtaacactgctgttggtttcaaaatttatggtccgga 1154
Query: 1059 tcgatctttcaaggaatatatggacaagggtgtctctttctctggttatactaacaccag 1118
||||||||||||||||||||| | || ||||| |||| ||| ||| ||||||| |
Sbjct: 1155 tcgatctttcaaggaatatattcaaaaaggtgtaacttttgctgcttacgctaacactac 1214
Query: 1119 tagtgtcagtggcagtttcgtgaatcatagatgggttgagcctggaaagtttttcagaga 1178
||| ||||||||||| || ||| ||||||||||||||||| ||||||||||| ||
Sbjct: 1215 cagtactagtggcagttttgtaaataggagatgggttgagcctggtaagtttttcaggga 1274
Query: 1179 gtccatgttaaagcaagggaatgttatggtaatgcccgatatcaccgataaaatgcctaa 1238
||||||||| ||||||||||||||| |||| |||||||| || || || |||||||| ||
Sbjct: 1275 gtccatgttgaagcaagggaatgttgtggtcatgcccgacattacagacaaaatgccaaa 1334
Query: 1239 aagatcatttttgccccgatcaattgtgtcgaaactaccattttcatcttctaatctttc 1298
|||||| ||| |||||||||| || || || ||||||||||| || || || ||| ||
Sbjct: 1335 aagatcgtttctgccccgatccatcgtttcaaaactaccattctcgtcccctcgtctgtc 1394
Query: 1299 cgagcttaagcaaatttttcatgcgccagaaaactcaaccatggagcgcgtgattaataa 1358
||||||||| || |||||||||| | || || |||||||||||| | ||| || ||
Sbjct: 1395 tgagcttaaggaagtttttcatgcacttgagaattcaaccatggagtgtgtgcttgtcaa 1454
Query: 1359 cgcgcttgctgagtgcgagagaacacccagccgtggcgagaccaagaggtgccttggctc 1418
|||||| || || ||||||||| |||||||| || ||||||||| |||| | |||||
Sbjct: 1455 cgcgctggccgaatgcgagagagaacccagccaaggtgagaccaagcggtgtgtgggctc 1514
Query: 1419 cattgaagatatggttgacttcgcagtctcggttttgagccacaatgtggtggttaggac 1478
| || || ||| | || || || || || || ||| |||| |||||||| || |||||
Sbjct: 1515 ggtggaggacatgatagagtttgccgtatcagtcttgggccataatgtggttgtcaggac 1574
Query: 1479 aactgaaaacgttcacggatcaaagaaaaatgtaacgatcggaacggtcaaaggaatcaa 1538
|| ||||| ||||| || |||| |||||||| | ||| || | ||||||||||||||
Sbjct: 1575 caccgaaaatgttcatgggtcaagtaaaaatgtgatgattgggagagtcaaaggaatcaa 1634
Query: 1539 cggtggagctgtgaccaaatcagtatcttgtcatcaaagcctgtatccttacttactgta 1598
|||||||| ||||| ||||| || |||||||| |||||| ||||||| ||||| || ||
Sbjct: 1635 cggtggagaagtgactaaatctgtctcttgtcaccaaagcttgtatccgtacttgcttta 1694
Query: 1599 ttattgtcattcggtgcccaaggttagggtttacgaggcagaaattcttgaagttgagag 1658
|||||| ||||| || |||| |||||| ||||| || || ||||||||||| ||||||||
Sbjct: 1695 ttattgccattcagttcccagggttagagtttatgaagctgaaattcttgacgttgagag 1754
Query: 1659 taaagcaaaaatcaacgttggagttgcaatctgtcatattgacacgtcagcttggagtcc 1718
|||| | ||||| |||| ||||||||||||||||||||||| ||||||||||| ||
Sbjct: 1755 caaagagaggatcaatcttggggttgcaatctgtcatattgacacatcagcttggagccc 1814
Query: 1719 agatcatggagcttttgtggcacttgggtccagccctggtcaaattgaggtttgccattg 1778
| ||||||| || || |||||| | | |||||||||||| ||||||||||||||||| ||
Sbjct: 1815 aaatcatggtgcgttcgtggcattagagtccagccctgggcaaattgaggtttgccactg 1874
Query: 1779 gatatttgagaatgatatgacttggac 1805
||||||||||||||| |||| ||||||
Sbjct: 1875 gatatttgagaatgacatgagttggac 1901
>29631.m001034 Polygalacturonase non-catalytic subunit AroGP2
precursor, putative
Length = 1596
Score = 75.8 bits (38), Expect = 8e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 1762 attgaggtttgccattggatatttgagaatgatatgacttggacaattgctgat 1815
||||| || |||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 1531 attgaagtctgccattggatatttgagaacgatatgacttggacaattactgat 1584
>29631.m001036 Polygalacturonase-1 non-catalytic subunit beta
precursor, putative
Length = 1896
Score = 56.0 bits (28), Expect = 8e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1762 attgaggtttgccattggatatttgagaatgatatgacttggac 1805
|||||||||||||| ||||| |||||||||||| | ||||||||
Sbjct: 1840 attgaggtttgccactggatttttgagaatgatcttacttggac 1883
Score = 54.0 bits (27), Expect = 3e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1225 gataaaatgcctaaaagatcatttttgccccgatc 1259
||||||||||||||||| |||||| ||||||||||
Sbjct: 1303 gataaaatgcctaaaaggtcatttctgccccgatc 1337