Jatropha Genome Database

JcCA0282311.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0282311.10 + phase: 0 /pseudo
         (216 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29693.m001985 (S)-2-hydroxy-acid oxidase, putative                    172   5e-43

>29693.m001985 (S)-2-hydroxy-acid oxidase, putative
          Length = 1110

 Score =  172 bits (87), Expect = 5e-43
 Identities = 126/139 (90%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagataaccaatgttatggaatatgaggaaattgctaggcagaaattgccaaagatg 60
           |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||
Sbjct: 1   atggagataaccaatgttatggaatatgaggaaattgcaaggcagaagttgccaaaaatg 60

                                                                       
Query: 61  gtttttgactactatgcatcaggagcagaagatcagtggactctcaaggagaatcgcaat 120
           ||||  ||||||||||||||||| ||||| || ||||||||| | |||||||| ||||||
Sbjct: 61  gtttacgactactatgcatcaggtgcagaggaccagtggactttgaaggagaaccgcaat 120

                              
Query: 121 gctttctctcgaattctgt 139
           || |||||| |||||||||
Sbjct: 121 gcattctctagaattctgt 139