Jatropha Genome Database
- JcCA0281201.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0281201.10 - phase: 0 /partial
(1122 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30076.m004583 conserved hypothetical protein 325 3e-88
>30076.m004583 conserved hypothetical protein
Length = 1317
Score = 325 bits (164), Expect = 3e-88
Identities = 332/388 (85%)
Strand = Plus / Plus
Query: 670 cctgcagtagttgaatttggagcggggagaggatacttgacacagatgctggcagattgt 729
|||||||| ||||| ||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 565 cctgcagttgttgagtttggagcggggagagggtacttgacacagatgcttgcagattgt 624
Query: 730 tatgggattcaaatggtctttttggttgaacgaaaatcatataaacttaaggctgatcga 789
|||||||| ||| ||| ||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 625 tatgggatcaaaagggtttttctggttgagagaaaatcatataaacttaaggctgatcga 684
Query: 790 tctctgcgacaaaaagacaatttgacattagagcgtttgagaattgatattgaggattta 849
|| ||||||| ||||| | |||| |||||||||||||||||||||||||||||||||
Sbjct: 685 tccttgcgacagaaagagagcttgatattagagcgtttgagaattgatattgaggatttg 744
Query: 850 aacttgaatgcagttgaatcactgctgggtcttccttttctagctataggcaaacatctt 909
|| |||||||| |||||||| | | || |||| | ||||||||| || ||||||||
Sbjct: 745 aatttgaatgctgttgaatccttacaaggagttccatatctagctattggaaaacatctc 804
Query: 910 tgtgggcctgcaactgatttgacgctaagatgttgccttccggaacaaagtagtgaaact 969
|||||||||||||| |||||||| | |||||||| || | | ||| ||||||| |
Sbjct: 805 tgtgggcctgcaaccgatttgactttgagatgttgtttttccaagcaatctagtgaacat 864
Query: 970 actatggaaaagtgcagtgtcaatcattcccttaagggccttgctatagcaacatgttgc 1029
| ||||| | | ||||||| |||| ||| ||| | |||||||||||||||||||||||||
Sbjct: 865 aatatgggacactgcagtgacaatgatttcctgaggggccttgctatagcaacatgttgc 924
Query: 1030 catcatctttgccagtggaagcattata 1057
||||||||||||||||||||||||||||
Sbjct: 925 catcatctttgccagtggaagcattata 952
Score = 319 bits (161), Expect = 2e-86
Identities = 350/413 (84%)
Strand = Plus / Plus
Query: 203 atggccagtggatcccctgcccgattgacccttcacattctgttcttaaagaaaatctcg 262
||||||| |||||||| ||||| || || |||||||||||||||||||||||||||| |
Sbjct: 107 atggccaatggatcccatgccctatcgattcttcacattctgttcttaaagaaaatcttg 166
Query: 263 acggacatgttacaagatgcccattgttgaaacaaacgcagtgtttgtccctgcaacctt 322
| |||||| ||| ||||| || || ||||| ||||| || | ||||| |||||||| |
Sbjct: 167 aaggacatattaagagatgtcctttattgaagcaaactcaatcgttgtctctgcaaccgt 226
Query: 323 tctaccagaagggcattaatgcaggtaaagaagaagaggaggacattacatctgaaatga 382
| |||||||| || || ||||| || |||||||| || || ||||| |||||||||||||
Sbjct: 227 tttaccagaaagggatcaatgctggcaaagaagatgatgatgacatcacatctgaaatga 286
Query: 383 agaggaatgctatttacggcatgactgtatctgaattttgtaaattaataaagaagattg 442
|||| |||||| |||| ||||||| ||||||||||| | |||||| |||||||||||||
Sbjct: 287 agagaaatgctgtttatagcatgaccgtatctgaattctataaattgataaagaagattg 346
Query: 443 agtcaatacatgctttgatatgtaaggatattgttgaatcttataagatgcctgaagctt 502
|||| || ||||||| ||||||| |||||| | ||||||| |||| |||||||||| |
Sbjct: 347 agtcgattcatgcttcattatgtaatgatattttggaatcttttaagttgcctgaagcat 406
Query: 503 gtaacgtttggattaggagagaaatagacaggaaattaccatttcaagagaaacacgtca 562
|||| | ||||||| ||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 407 gtaatatgtggattaagagagaaatagacagtcaattaccatttcaagagaaacatgtca 466
Query: 563 agcaacaagcatcaattcttggaaatttggaggattttggggcgttaaagagt 615
|||||||||| |||| |||||||| |||||||||||||| | ||||||||||
Sbjct: 467 agcaacaagctgcaatacttggaaacttggaggattttggagtgttaaagagt 519