Jatropha Genome Database
- JcCA0280621.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0280621.10 + phase: 0 /pseudo/partial
(714 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30147.m013950 conserved hypothetical protein 347 6e-95
>30147.m013950 conserved hypothetical protein
Length = 1608
Score = 347 bits (175), Expect = 6e-95
Identities = 286/323 (88%)
Strand = Plus / Plus
Query: 371 aggaaatgaaatcaatgagtatggcgatacacaaattggaaggacaagctaataaccttg 430
|||||||||| || ||||||| || ||||||||||||||||||||| |||||||||||
Sbjct: 773 aggaaatgaagtctatgagtaccgcaatacacaaattggaaggacaaaataataaccttg 832
Query: 431 gaagaacatctcttgctgatcaagaagattatacactctcagtggcaaatcatcctaagc 490
| ||||| ||||||| | |||||||| |||||||||||||||| ||||||||||||||
Sbjct: 833 ggagaacctctcttgtcaaccaagaagactatacactctcagtgggaaatcatcctaagc 892
Query: 491 aaacctatgtgaatgggaaggcggattctgatttgcgctcagtgagatcttcctcgccgc 550
|||||||||| |||||||||| ||| ||||||| || ||||||||||||||||||| |
Sbjct: 893 aaacctatgtcaatgggaaggtggagtctgattcacgtgcagtgagatcttcctcgccac 952
Query: 551 ccacgtctgctgaaccctcagtagcaccacacccaaagtcatatatggagatcatggcaa 610
|||| |||||||||| | || |||||||||||||| || |||||||||||||||||||
Sbjct: 953 ccacagctgctgaacctactgttgcaccacacccaaaatcgtatatggagatcatggcaa 1012
Query: 611 tggtccaaagaggagagagacctccaaacatcagagatatcaatgatcaaccgcccaacc 670
|||| ||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| |
Sbjct: 1013 tggttcaaagaggagagagacctccaaacatcagggatgtcaatgatcaaccacccaatc 1072
Query: 671 ctaaccagcaaatttcaaatcct 693
|||||||| ||||||||||||||
Sbjct: 1073 ctaaccagaaaatttcaaatcct 1095
Score = 206 bits (104), Expect = 1e-52
Identities = 304/370 (82%), Gaps = 3/370 (0%)
Strand = Plus / Plus
Query: 3 tcaacatcaaatgttcagccgccagcccagacacaagttcttcagcctgcagcagctgct 62
|||||||||||| ||||||| || | || ||||||| |||||||||||||||||||||
Sbjct: 358 tcaacatcaaatattcagccagcatcgcaaacacaagctcttcagcctgcagcagctgcg 417
Query: 63 cctactggtactgtttcctctgtggcaactttagcaagatcccgttttcaatggtatcat 122
|| |||||| | ||||||||| | ||||||| || | || || || |||||||||
Sbjct: 418 ccaactggtgccatttcctctgcaggaactttaatgcgaactcgattccattggtatcat 477
Query: 123 gctgttttagcagtaggattactggcagcttcaggtgctgggacagctgtcctgattaag 182
|||||||| || ||||| | ||||| |||||||||||||| ||||||||| | ||||||
Sbjct: 478 gctgtttttgctgtaggggttctggccgcttcaggtgctggaacagctgtcttaattaag 537
Query: 183 aatgctattgttcccagactgaagttgtggatacgcaaggttgtattggaagaagaagaa 242
||| ||||||||| ||| | |||| |||||||| |||||||| || |||| |||||
Sbjct: 538 aattgtattgttccaagattcaagtcttggatacgtaaggttgttttcgaag---aagaa 594
Query: 243 gactctatgaagaaagttaatgcaaaaccaagtttggcagaagaggcagctgcagccgca 302
|| || |||| ||| ||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 595 gatcctgtgaaaaaaactaatgcaaaaccaagtttggcagaagaagcagcagcagctgca 654
Query: 303 aaatcagctgcagcagcggcagctgatgttgcaaaagcaagccaagaaatcttgaattca 362
||| | ||||||||||| || ||||||||||| ||||||||||| || || |||| |||
Sbjct: 655 aaagctgctgcagcagcagctgctgatgttgccaaagcaagccaggagatgctgaactca 714
Query: 363 aaaagtgaag 372
|||| |||||
Sbjct: 715 aaaaatgaag 724